SWIPE 2.1.1-GCC-10.3.0Smith-Waterman database searches with inter-sequence SIMD parallelisation
Accessing SWIPE 2.1.1-GCC-10.3.0
To load the module for SWIPE 2.1.1-GCC-10.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load SWIPE/2.1.1-GCC-10.3.0
BEAR Apps Version
EL8-cascadelake — EL8-haswell — EL8-icelake
The listed architectures consist of two part: OS-CPU.
- BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
- BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.
For more information visit the SWIPE website.
This version of SWIPE has a direct dependency on: GCC/10.3.0
This version of SWIPE is a direct dependent of: ORTHOLOGER/2.4.3-foss-2021a
Last modified on 22nd June 2022