ORTHOLOGER 2.4.3-foss-2021aOrthoDB standalone pipeline for delineation of orthologs
Accessing ORTHOLOGER 2.4.3-foss-2021a
To load the module for ORTHOLOGER 2.4.3-foss-2021a please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load ORTHOLOGER/2.4.3-foss-2021a
BEAR Apps Version
The listed architectures consist of two part: OS-CPU.
- BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
- BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.
For more information visit the ORTHOLOGER website.
This version of ORTHOLOGER has a direct dependency on: BLAST+/2.11.0-gompi-2021a BRHCLUS/4.7.2-foss-2021a CD-HIT/4.8.1-GCC-10.3.0 ETE/3.1.2-foss-2021a foss/2021a matplotlib/3.4.2-foss-2021a MMseqs2/13-45111-gompi-2021a Perl/5.32.1-GCCcore-10.3.0 Python/3.9.5-GCCcore-10.3.0 Seaborn/0.11.2-foss-2021a SWIPE/2.1.1-GCC-10.3.0
Last modified on 22nd June 2022