ORTHOLOGER 2.4.3-foss-2021a

OrthoDB standalone pipeline for delineation of orthologs

Accessing ORTHOLOGER 2.4.3-foss-2021a

To load the module for ORTHOLOGER 2.4.3-foss-2021a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load ORTHOLOGER/2.4.3-foss-2021a

BEAR Apps Version

2021a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the ORTHOLOGER website.

Dependencies

This version of ORTHOLOGER has a direct dependency on: BLAST+/2.11.0-gompi-2021a BRHCLUS/4.7.2-foss-2021a CD-HIT/4.8.1-GCC-10.3.0 ETE/3.1.2-foss-2021a foss/2021a matplotlib/3.4.2-foss-2021a MMseqs2/13-45111-gompi-2021a Perl/5.32.1-GCCcore-10.3.0 Python/3.9.5-GCCcore-10.3.0 Seaborn/0.11.2-foss-2021a SWIPE/2.1.1-GCC-10.3.0

Last modified on 22nd June 2022