AMRFinderPlus 3.11.26-gompi-2022b

There is a newer install of AMRFinderPlus

This software and the accompanying database are designed to find acquired antimicrobial resistance genes and some point mutations in protein or assembled nucleotide sequences.

Accessing AMRFinderPlus 3.11.26-gompi-2022b

To load the module for AMRFinderPlus 3.11.26-gompi-2022b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022b
module load AMRFinderPlus/3.11.26-gompi-2022b

BEAR Apps Version

2022b

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the AMRFinderPlus website.

Dependencies

This version of AMRFinderPlus has a direct dependency on: BLAST+/2.14.0-gompi-2022b cURL/7.86.0-GCCcore-12.2.0 gompi/2022b HMMER/3.3.2-gompi-2022b

Required By

This version of AMRFinderPlus is a direct dependent of: bakta/1.9.4-foss-2022b

Other Versions

These versions of AMRFinderPlus are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 31st July 2024