TPMCalculator 0.0.4-GCC-12.2.0

TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files.

Accessing TPMCalculator 0.0.4-GCC-12.2.0

To load the module for TPMCalculator 0.0.4-GCC-12.2.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022b
module load TPMCalculator/0.0.4-GCC-12.2.0

BEAR Apps Version

2022b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the TPMCalculator website.

Dependencies

This version of TPMCalculator has a direct dependency on: BamTools/2.5.2-GCC-12.2.0 GCC/12.2.0

Last modified on 22nd May 2024