MetaPhlAn 4.1.1-foss-2023a

MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

Accessing MetaPhlAn 4.1.1-foss-2023a

To load the module for MetaPhlAn 4.1.1-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load MetaPhlAn/4.1.1-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• hclust2 1.0.0
• MetaPhlAn 4.1.1

More Information

For more information visit the MetaPhlAn website.

Dependencies

This version of MetaPhlAn has a direct dependency on: biom-format/2.1.15-foss-2023a Biopython/1.83-foss-2023a CMSeq/1.0.4-foss-2023a DendroPy/4.6.1-GCCcore-12.3.0 foss/2023a h5py/3.9.0-foss-2023a PhyloPhlAn/3.1.1-foss-2023a Pysam/0.22.0-GCC-12.3.0 Python/3.11.3-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a

Required By

This version of MetaPhlAn is a direct dependent of: humann/4.0.0a1-foss-2023a

Other Versions

These versions of MetaPhlAn are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 29th April 2025