OrthoFinder 2.5.5-foss-2023a

Phylogenetic orthology inference for comparative genomics

Accessing OrthoFinder 2.5.5-foss-2023a

To load the module for OrthoFinder 2.5.5-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load OrthoFinder/2.5.5-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-emeraldrapids — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the OrthoFinder website.

Dependencies

This version of OrthoFinder has a direct dependency on: BLAST+/2.14.1-gompi-2023a DIAMOND/2.1.8-GCC-12.3.0 FastME/2.1.6.3-GCC-12.3.0 foss/2023a MCL/22.282-GCCcore-12.3.0 MMseqs2/14-7e284-gompi-2023a Python/3.11.3-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a

Other Versions

These versions of OrthoFinder are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 15th June 2026