figeno 1.6.6-foss-2023a

Tool for plotting sequencing data along genomic coordinates.

Accessing figeno 1.6.6-foss-2023a

To load the module for figeno 1.6.6-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load figeno/1.6.6-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• asciitree 0.3.3
• bottle 0.12.25
• cooler 0.9.3
• cytoolz 0.12.2
• figeno 1.6.6
• filedialpy 1.2.0
• importlib_resources 6.1.1
• proxy_tools 0.1.0
• pywebview 4.4.1
• toolz 0.12.0
• vcfpy 0.13.6

More Information

For more information visit the figeno website.

Dependencies

This version of figeno has a direct dependency on: Flask/2.3.3-GCCcore-12.3.0 foss/2023a h5py/3.9.0-foss-2023a hatchling/1.18.0-GCCcore-12.3.0 matplotlib/3.7.2-gfbf-2023a multiprocess/0.70.15-gfbf-2023a pyBigWig/0.3.22-gfbf-2023a pyfaidx/0.8.1.1-GCCcore-12.3.0 Pysam/0.22.0-GCC-12.3.0 Python/3.11.3-GCCcore-12.3.0 PyYAML/6.0-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a

Last modified on 30th April 2025