ichorCNA 0.3.2-20191219-foss-2023a-R-4.4.1

ichorCNA is a tool for estimating the fraction of tumor in cell-free DNA from ultra-low-pass whole genome sequencing

Accessing ichorCNA 0.3.2-20191219-foss-2023a-R-4.4.1

To load the module for ichorCNA 0.3.2-20191219-foss-2023a-R-4.4.1 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load ichorCNA/0.3.2-20191219-foss-2023a-R-4.4.1

BEAR Apps Version

2023a

Architectures

EL8-emr — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the ichorCNA website.

Dependencies

This version of ichorCNA has a direct dependency on: foss/2023a hmmcopy_utils/20210728-GCCcore-12.3.0 R/4.4.1-gfbf-2023a R-bundle-Bioconductor/3.19-foss-2023a-R-4.4.1

Last modified on 21st March 2025