SoupX
Quantify, profile and remove ambient mRNA contamination (the "soup") from droplet based single cell RNA-seq experiments. Implements the method described in Young et al. (2018)More Information
For more information visit the SoupX website.
Available Versions
These versions of SoupX are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 1.4.8-foss-2019b-R-3.6.2 | 2019b |