snpEff
snpEff is a genetic variant annotation and effect prediction toolbox. It annotates and predicts the effects of variants on genes (such as amino acid changes).
More Information
For more information visit the snpEff website.
Available Versions
These versions of snpEff are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 5.2c-GCCcore-12.2.0-Java-11 | 2022b |
| 5.0e-GCCcore-11.2.0-Java-11 | 2021b |
| 4.5covid19-Java-1.8 | 2019b |