FSL 6.0.1-foss-2018b

Deprecated: Use of this version of FSL is deprecated. More information on our Applications Support and Retention Policy.

There is a newer version of FSL

FSL is a comprehensive library of analysis tools for FMRI, MRI and DTI brain imaging data.

Accessing FSL 6.0.1-foss-2018b

To load the module for FSL 6.0.1-foss-2018b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load FSL/6.0.1-foss-2018b

BEAR Apps Version

2018b

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the FSL website.

Dependencies

This version of FSL has a direct dependency on: expat/2.2.5-GCCcore-7.3.0 foss/2018b freeglut/3.0.0-foss-2018b GSL/2.5-GCC-7.3.0-2.30 libgd/2.2.5-GCCcore-7.3.0 libiconv/1.15-GCCcore-7.3.0 libpng/1.6.34-GCCcore-7.3.0 libxml2/2.9.8-GCCcore-7.3.0 NLopt/2.4.2-GCCcore-7.3.0 SQLite/3.24.0-GCCcore-7.3.0 Tk/8.6.8-GCCcore-7.3.0 VTK/8.1.1-foss-2018b-Python-2.7.15 zlib/1.2.11-GCCcore-7.3.0

Other Versions

These versions of FSL are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 4th June 2019