eggnog-mapper 1.0.3-foss-2019b-Python-2.7.16

eggnog-mapper is a tool for fast functional annotation of novel sequences (genes or proteins) using precomputed eggNOG-based orthology assignments

Accessing eggnog-mapper 1.0.3-foss-2019b-Python-2.7.16

To load the module for eggnog-mapper 1.0.3-foss-2019b-Python-2.7.16 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load eggnog-mapper/1.0.3-foss-2019b-Python-2.7.16

BEAR Apps Version

2019b

Architectures

EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the eggnog-mapper website.

Dependencies

This version of eggnog-mapper has a direct dependency on: Biopython/1.75-foss-2019b-Python-2.7.16 DIAMOND/0.9.30-GCC-8.3.0 foss/2019b HMMER/3.2.1-gompi-2019b Python/2.7.16-GCCcore-8.3.0 wget/1.20.1-GCCcore-8.3.0

Required By

This version of eggnog-mapper is a direct dependent of: funannotate/1.8.1-foss-2019b-Python-2.7.16

Last modified on 19th October 2020