Mashtree 1.2.0-foss-2020a-Perl-5.30.2

Create a tree using Mash distances.

Accessing Mashtree 1.2.0-foss-2020a-Perl-5.30.2

To load the module for Mashtree 1.2.0-foss-2020a-Perl-5.30.2 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Mashtree/1.2.0-foss-2020a-Perl-5.30.2

BEAR Apps Version

2020a

Architectures

EL8-cascadelake — EL8-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the Mashtree website.

Dependencies

This version of Mashtree has a direct dependency on: BioPerl/1.7.7-GCCcore-9.3.0 foss/2020a Mash/2.3-foss-2020a Perl/5.30.2-GCCcore-9.3.0 quicktree/2.5-GCCcore-9.3.0 SQLite/3.31.1-GCCcore-9.3.0

Last modified on 19th March 2021