TFBSTools 1.28.0-foss-2020b-R-4.0.3TFBSTools is a package for the analysis and manipulation of transcription factor binding sites.
Accessing TFBSTools 1.28.0-foss-2020b-R-4.0.3
To load the module for TFBSTools 1.28.0-foss-2020b-R-4.0.3 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):
module load TFBSTools/1.28.0-foss-2020b-R-4.0.3
BEAR Apps Version
EL8-cascadelake — EL8-haswell — Ubuntu20.04-haswell
The listed architectures consist of two part: OS-CPU.
- BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
- BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.
- caTools 1.18.2
- CNEr 1.26.0
- DBI 1.1.1
- DirichletMultinomial 1.32.0
- gtools 3.9.2
- poweRlaw 0.70.6
- RSQLite 2.2.7
- TFBSTools 1.28.0
- TFMPvalue 0.0.8
For more information visit the TFBSTools website.
This version of TFBSTools has a direct dependency on: foss/2020b R/4.0.3-foss-2020b R-bundle-Bioconductor/3.12-foss-2020b-R-4.0.3
This version of TFBSTools is a direct dependent of: motifmatchr/1.12.0-foss-2020b-R-4.0.3
Last modified on 22nd June 2021