EnhancedVolcano 20211028-foss-2021a-R-4.1.0

Volcano plots represent a useful way to visualise the results of differential expression analyses. Here, we present a highly-configurable function that produces publication-ready volcano plots. EnhancedVolcano will attempt to fit as many point labels in the plot window as possible, thus avoiding 'clogging' up the plot with labels that could not otherwise have been read. Other functionality allows the user to identify up to 4 different types of attributes in the same plot space via colour, shape, size, and shade parameter configurations.

Accessing EnhancedVolcano 20211028-foss-2021a-R-4.1.0

To load the module for EnhancedVolcano 20211028-foss-2021a-R-4.1.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load EnhancedVolcano/20211028-foss-2021a-R-4.1.0

BEAR Apps Version

2021a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• EnhancedVolcano 20211028

More Information

For more information visit the EnhancedVolcano website.

Dependencies

This version of EnhancedVolcano has a direct dependency on: foss/2021a R/4.1.0-foss-2021a

Required By

This version of EnhancedVolcano is a direct dependent of: BEAR-R-bio/2021a-foss-2021a-R-4.1.0

Other Versions

These versions of EnhancedVolcano are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 8th November 2021