FastANI 1.33-GCC-10.3.0

FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI). ANI is defined as mean nucleotide identity of orthologous gene pairs shared between two microbial genomes. FastANI supports pairwise comparison of both complete and draft genome assemblies.

Accessing FastANI 1.33-GCC-10.3.0

To load the module for FastANI 1.33-GCC-10.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load FastANI/1.33-GCC-10.3.0

BEAR Apps Version

2021a

Architectures

EL8-cascadelake — EL8-haswell — EL8-icelake

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the FastANI website.

Dependencies

This version of FastANI has a direct dependency on: GCC/10.3.0 GSL/2.7-GCC-10.3.0 zlib/1.2.11-GCCcore-10.3.0

Required By

This version of FastANI is a direct dependent of: GTDB-Tk/2.0.0-foss-2021a

Last modified on 22nd April 2022