Kalign 3.3.1-GCCcore-10.3.0

Kalign is a fast multiple sequence alignment program for biological sequences.

Accessing Kalign 3.3.1-GCCcore-10.3.0

To load the module for Kalign 3.3.1-GCCcore-10.3.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Kalign/3.3.1-GCCcore-10.3.0

BEAR Apps Version

2021a

Architectures

EL8-cascadelakeEL8-haswellEL8-icelake

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the Kalign website.

Dependencies

This version of Kalign has a direct dependency on: GCCcore/10.3.0

Required By

This version of Kalign is a direct dependent of: AlphaFold/2.1.1-foss-2021a AlphaFold/2.1.1-foss-2021a-CUDA-11.3.1

Last modified on 26th November 2021