demultiplex 1.2.2-foss-2021a

Versatile NGS demultiplexer with the following features: Support for FASTA and FASTQ files.Support for gzip and bzip2 compressed files. Support for multiple reads per fragment, e.g., paired-end.

Accessing demultiplex 1.2.2-foss-2021a

To load the module for demultiplex 1.2.2-foss-2021a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load demultiplex/1.2.2-foss-2021a

BEAR Apps Version

2021a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• demultiplex 1.2.2
• dict-trie-1.0.1
• fastools 1.1.4
• jit_open 1.0.2
• python-Levenshtein-0.12.2
• tssv 1.1.2
• xopen 1.2.1

More Information

For more information visit the demultiplex website.

Dependencies

This version of demultiplex has a direct dependency on: Biopython/1.79-foss-2021a foss/2021a Python/3.9.5-GCCcore-10.3.0 python-isal/0.11.0-GCCcore-10.3.0

Last modified on 7th December 2021