MUSCLE 5.1-GCCcore-11.2.0

MUSCLE is one of the best-performing multiple alignment programs according to published benchmark tests, with accuracy and speed that are consistently better than CLUSTALW. MUSCLE can align hundreds of sequences in seconds. Most users learn everything they need to know about MUSCLE in a few minutes-only a handful of command-line options are needed to perform common alignment tasks.

Accessing MUSCLE 5.1-GCCcore-11.2.0

To load the module for MUSCLE 5.1-GCCcore-11.2.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2021b
module load MUSCLE/5.1-GCCcore-11.2.0

BEAR Apps Version

2021b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the MUSCLE website.

Dependencies

This version of MUSCLE has a direct dependency on: GCCcore/11.2.0

Required By

This version of MUSCLE is a direct dependent of: PhyloPhlAn/3.0.2-foss-2021b

Other Versions

These versions of MUSCLE are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 14th July 2022