czifile 2019.7.2-foss-2021b

Czifile is a Python library to read Carl Zeiss Image (CZI) files, the native file format of the ZEN(r) software by Carl Zeiss Microscopy GmbH. CZI files contain multidimensional images and metadata from microscopy experiments.

Accessing czifile 2019.7.2-foss-2021b

To load the module for czifile 2019.7.2-foss-2021b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2021b
module load czifile/2019.7.2-foss-2021b

BEAR Apps Version

2021b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• czifile 2019.7.2
• imagecodecs 2023.1.23
• tifffile 2023.2.3

More Information

For more information visit the czifile website.

Dependencies

This version of czifile has a direct dependency on: foss/2021b Python/3.9.6-GCCcore-11.2.0 SciPy-bundle/2021.10-foss-2021b

Last modified on 28th March 2023