loompy 3.0.7-foss-2022a

Python implementation of the Loom file format, an efficient file format for large omics datasets

Accessing loompy 3.0.7-foss-2022a

To load the module for loompy 3.0.7-foss-2022a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022a
module load loompy/3.0.7-foss-2022a

BEAR Apps Version

2022a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• loompy 3.0.7
• numpy-groupies-0.9.20

More Information

For more information visit the loompy website.

Dependencies

This version of loompy has a direct dependency on: foss/2022a h5py/3.7.0-foss-2022a numba/0.56.4-foss-2022a Python/3.10.4-GCCcore-11.3.0 SciPy-bundle/2022.05-foss-2022a

Required By

This version of loompy is a direct dependent of: pySCENIC/0.12.1-foss-2022a scArches/0.6.1-foss-2022a-CUDA-11.7.0 scArches/0.6.1-foss-2022a

Other Versions

These versions of loompy are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 9th April 2024