Bio-SearchIO-hmmer 1.7.3-GCC-12.3.0

There is a newer install of Bio-SearchIO-hmmer

Code to parse output from hmmsearch, hmmscan, phmmer and nhmmer, compatible with both version 2 and version 3 of the HMMER package from http://hmmer.org.

Accessing Bio-SearchIO-hmmer 1.7.3-GCC-12.3.0

To load the module for Bio-SearchIO-hmmer 1.7.3-GCC-12.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load Bio-SearchIO-hmmer/1.7.3-GCC-12.3.0

BEAR Apps Version

2023a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the Bio-SearchIO-hmmer website.

Dependencies

This version of Bio-SearchIO-hmmer has a direct dependency on: BioPerl/1.7.8-GCCcore-12.3.0 GCC/12.3.0 Perl/5.36.1-GCCcore-12.3.0

Required By

This version of Bio-SearchIO-hmmer is a direct dependent of: prokka/1.14.5-gompi-2023a

Other Versions

These versions of Bio-SearchIO-hmmer are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 4th March 2025