InterProScan 5.70-102.0-foss-2023a
InterProScan can be used to run the scanning algorithms from the InterPro database in an integrated way. Sequences are submitted in FASTA format. Matches are then calculated against all of the required member database's signatures and the results are then output in a variety of formats.Accessing InterProScan 5.70-102.0-foss-2023a
To load the module for InterProScan 5.70-102.0-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2023a
module load InterProScan/5.70-102.0-foss-2023a
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-emr — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the InterProScan website.
Dependencies
This version of InterProScan has a direct dependency on: foss/2023a Java/11 libgd/2.3.3-GCCcore-12.3.0 Perl/5.36.1-GCCcore-12.3.0 Python/3.11.3-GCCcore-12.3.0
Other Versions
These versions of InterProScan are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 5.68-100.0-foss-2023a | 2023a |
| 5.61-93.0-foss-2022a | 2022a |
| 5.55-88.0-foss-2021a | 2021a |
| 5.31-70.0-GCCcore-8.3.0-Python-3.7.4-Java-1.8 | 2019b |
Last modified on 14th October 2024