biom-format 2.1.15-foss-2023a

There is a newer install of biom-format

The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium supported project.

Accessing biom-format 2.1.15-foss-2023a

To load the module for biom-format 2.1.15-foss-2023a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load biom-format/2.1.15-foss-2023a

BEAR Apps Version

2023a

Architectures

EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the biom-format website.

Dependencies

This version of biom-format has a direct dependency on: foss/2023a h5py/3.9.0-foss-2023a Python/3.11.3-GCCcore-12.3.0 SciPy-bundle/2023.07-gfbf-2023a

Required By

This version of biom-format is a direct dependent of: CMSeq/1.0.4-foss-2023a MetaPhlAn/4.1.1-foss-2023a

Other Versions

These versions of biom-format are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 29th April 2025