biom-format 2.1.12-foss-2021b

The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium supported project.

Accessing biom-format 2.1.12-foss-2021b

To load the module for biom-format 2.1.12-foss-2021b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2021b
module load biom-format/2.1.12-foss-2021b

BEAR Apps Version

2021b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the biom-format website.

Dependencies

This version of biom-format has a direct dependency on: foss/2021b h5py/3.6.0-foss-2021b Python/3.9.6-GCCcore-11.2.0 SciPy-bundle/2021.10-foss-2021b

Required By

This version of biom-format is a direct dependent of: CMSeq/1.0.4-foss-2021b MetaPhlAn/3.0.14-foss-2021b

Other Versions

These versions of biom-format are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 14th July 2022