ont-remora 3.3.0-foss-2023a-CUDA-12.1.1

Methylation/modified base calling separated from basecalling. Remora primarily provides an API to call modified bases for basecaller programs such as Bonito. Remora also provides the tools to prepare datasets, train modified base models and run simple inference.

Accessing ont-remora 3.3.0-foss-2023a-CUDA-12.1.1

To load the module for ont-remora 3.3.0-foss-2023a-CUDA-12.1.1 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a
module load ont-remora/3.3.0-foss-2023a-CUDA-12.1.1

BEAR Apps Version

2023a

Architectures

EL8-icelake (GPUs: NVIDIA A100, NVIDIA A30)

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• mizani 0.9.3
• ont-remora-3.3.0
• plotnine 0.12.4
• thop 0.1.1.post2209072238

More Information

For more information visit the ont-remora website.

Other Versions

These versions of ont-remora are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 16th June 2025