MAFFT

MAFFT is a multiple sequence alignment program for unix-like operating systems. It offers a range of multiple alignment methods, L-INS-i (accurate; for alignment of <~200 sequences), FFT-NS-2 (fast; for alignment of <~10,000 sequences), etc.

More Information

For more information visit the MAFFT website.

Available Versions

These versions of MAFFT are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
7.505-GCC-12.2.0-with-extensions	2022b
7.505-GCC-11.3.0-with-extensions	2022a
7.490-gompi-2021b-with-extensions	2021b
7.490-GCC-11.2.0-with-extensions	2021b
7.453-GCC-9.3.0-with-extensions	2020a
7.453-GCC-8.3.0-with-extensions	2019b