Split k-mer analysis (version 2) uses exact matching of split k-mer sequences to align closely related sequences, typically small haploid genomes such as bacteria and viruses.

More Information

For more information visit the SKA2 website.

Available Versions

These versions of SKA2 are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
0.3.4-GCCcore-11.3.0 2022a