AUGUSTUS 3.3.2-foss-2018b-Python-2.7.15

Deprecated: Use of this version of AUGUSTUS is deprecated. More information on our Applications Support and Retention Policy.

There is a newer install of AUGUSTUS

AUGUSTUS is a program that predicts genes in eukaryotic genomic sequences

Accessing AUGUSTUS 3.3.2-foss-2018b-Python-2.7.15

To load the module for AUGUSTUS 3.3.2-foss-2018b-Python-2.7.15 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load AUGUSTUS/3.3.2-foss-2018b-Python-2.7.15

BEAR Apps Version

2018b

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the AUGUSTUS website.

Dependencies

This version of AUGUSTUS has a direct dependency on: BamTools/2.5.1-foss-2018b BCFtools/1.9-foss-2018b Boost.Python/1.67.0-foss-2018b-Python-2.7.15 foss/2018b GSL/2.5-GCC-7.3.0-2.30 HTSlib/1.9-foss-2018b lpsolve/5.5.2.5-foss-2018b Python/2.7.15-foss-2018b SAMtools/1.9-foss-2018b SQLite/3.24.0-GCCcore-7.3.0 SuiteSparse/5.1.2-foss-2018b-METIS-5.1.0 tabix/0.2.6-GCCcore-7.3.0 zlib/1.2.11-GCCcore-7.3.0

Required By

This version of AUGUSTUS is a direct dependent of: BUSCO/3.0.2-foss-2018b-Python-2.7.15

Other Versions

These versions of AUGUSTUS are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
3.5.0-foss-2022b 2022b
3.3.3-foss-2019b 2019b

Last modified on 3rd June 2019