ont-fast5-api 1.3.0-foss-2018b-Python-3.6.6

Deprecated: Use of this version of ont-fast5-api is deprecated. More information on our Applications Support and Retention Policy.

There is a newer install of ont-fast5-api

ont_fast5_api is a simple interface to HDF5 files of the Oxford Nanopore fast5 file format.

Accessing ont-fast5-api 1.3.0-foss-2018b-Python-3.6.6

To load the module for ont-fast5-api 1.3.0-foss-2018b-Python-3.6.6 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load ont-fast5-api/1.3.0-foss-2018b-Python-3.6.6

BEAR Apps Version

2018b

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

  • ont-fast5-api-1.3.0
  • progressbar33 2.4

More Information

For more information visit the ont-fast5-api website.

Dependencies

This version of ont-fast5-api has a direct dependency on: foss/2018b h5py/2.8.0-foss-2018b-Python-3.6.6 Python/3.6.6-foss-2018b

Other Versions

These versions of ont-fast5-api are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 5th June 2019