ont-fast5-api 4.1.1-foss-2022a

ont_fast5_api is a simple interface to HDF5 files of the Oxford Nanopore fast5 file format.

Accessing ont-fast5-api 4.1.1-foss-2022a

To load the module for ont-fast5-api 4.1.1-foss-2022a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022a
module load ont-fast5-api/4.1.1-foss-2022a

BEAR Apps Version

2022a

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

  • ont-fast5-api-4.1.1
  • progressbar33 2.4

More Information

For more information visit the ont-fast5-api website.

Dependencies

This version of ont-fast5-api has a direct dependency on: foss/2022a h5py/3.7.0-foss-2022a Python/3.10.4-GCCcore-11.3.0 SciPy-bundle/2022.05-foss-2022a

Required By

This version of ont-fast5-api is a direct dependent of: medaka/1.11.1-foss-2022a

Other Versions

These versions of ont-fast5-api are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 14th November 2023