velocyto 0.17.17-foss-2019a-Python-3.7.2

There is a newer install of velocyto

Velocyto is a library for the analysis of RNA velocity.

Accessing velocyto 0.17.17-foss-2019a-Python-3.7.2

To load the module for velocyto 0.17.17-foss-2019a-Python-3.7.2 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load velocyto/0.17.17-foss-2019a-Python-3.7.2

BEAR Apps Version

2019a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

• loompy 3.0.6
• numpy-groupies-0.9.8.4
• velocyto 0.17.17

More Information

For more information visit the velocyto website.

Dependencies

This version of velocyto has a direct dependency on: foss/2019a h5py/2.10.0-foss-2019a matplotlib/3.0.3-foss-2019a-Python-3.7.2 numba/0.43.1-foss-2019a Pysam/0.15.2-foss-2019a Python/3.7.2-GCCcore-8.2.0 scikit-learn/0.20.3-foss-2019a

Other Versions

These versions of velocyto are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 12th December 2019