Java 11

There is a newer version of Java

Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers.

Accessing Java 11

To load the module for Java 11 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load Java/11

BEAR Apps Version

2020b

Architectures

EL8-cascadelakeEL8-haswellsystemUbuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

More Information

For more information visit the Java website.

Required By

This version of Java is a direct dependent of: ant/1.10.7-Java-11 ant/1.10.11-Java-11 ant/1.10.8-Java-11 ant/1.10.9-Java-11 ANTLR/2.7.7-GCCcore-9.3.0-Java-11 ANTLR/2.7.7-foss-2019a Bazel/2.0.0-GCCcore-8.3.0 Bazel/3.7.2-GCCcore-10.3.0 Bazel/0.26.1-GCCcore-8.3.0 Bazel/3.6.0-GCCcore-9.3.0 Bazel/4.2.2-GCCcore-11.2.0 Bazel/3.7.2-GCCcore-10.2.0 Bazel/3.7.2-GCCcore-11.2.0 BBMap/38.90-GCC-10.2.0 BBMap/38.87-GCC-8.3.0 Beagle/5.1-25Nov19.28d-Java-11 beagle-lib/3.1.2-GCC-9.3.0 BMDExpress2/2.30.0502 canu/1.9-GCCcore-8.3.0-Perl-5.30.0 cell2location/0.05-alpha-fosscuda-2020b cell2location/0.05-alpha-foss-2020b CPLEX/20.10-GCCcore-10.2.0 CST-Studio-Suite/2022.SP4-GCCcore-10.3.0-Java-11 DualSPHysics/5.0.175-foss-2021a-CUDA-11.3.1 DualSPHysics/5.0.164-fosscuda-2020a-Java-11 DualSPHysics/5.0.164-foss-2020a-Java-11 DualSPHysics/5.0.175-foss-2021a esoreflex/2.11.5-foss-2020b FastQC/0.11.9-Java-11 GATK/4.1.5.0-GCCcore-9.3.0-Java-11 GATK/4.2.0.0-GCCcore-10.2.0-Java-11 GingerALE/3.0.2 Graphviz/2.44.1-foss-2020a Graphviz/2.50.0-GCCcore-11.2.0 Graphviz/2.47.2-GCCcore-10.3.0 Graphviz/2.47.0-GCCcore-10.2.0-Java-11 Groovy/4.0.3-Java-11 hyperopt/0.2.5-fosscuda-2020b hyperopt/0.2.5-foss-2020b IGV/2.6.2-Java-11 IGV/2.8.0-Java-11 KneadData/0.7.6-foss-2019b-Python-3.7.4-Java-11 MALLET/202108 MCR/R2016a Micro-Manager/1.4.24-foss-2021b MuTect/1.1.7-Java-11 neuropythy/0.11.8-foss-2019b-Python-3.7.4-Java-11 neuropythy/0.11.8-fosscuda-2019b-Python-3.7.4-Java-11 Nextflow/22.04.0 NGS/2.10.4-GCCcore-8.3.0-Java-11 NGS/2.10.9-GCCcore-10.2.0 NGS/2.9.6-foss-2019a-Java-11 OpenCV/4.4.0-fosscuda-2020a-Python-3.8.2 OpenCV/4.5.5-foss-2021b-contrib OpenCV/4.2.0-foss-2019b-Python-3.7.4 OpenCV/4.2.0-fosscuda-2019b-Python-3.7.4 OpenCV/4.5.1-fosscuda-2020b-contrib OpenCV/4.5.1-foss-2020b-contrib OpenCV/4.5.3-foss-2021a-CUDA-11.3.1-contrib OpenCV/4.5.3-foss-2021a-contrib OpenCV/4.4.0-foss-2020a-Python-3.8.2 picard/2.21.1-Java-11 Pilon/1.23-Java-11 prokka/1.14.5-gompi-2019b PyImageJ/1.3.1-foss-2021a python-bioformats/4.0.0-foss-2020a-Python-3.8.2 python-bioformats/4.0.0-fosscuda-2019b-Python-3.7.4 python-bioformats/4.0.0-foss-2019b-Python-3.7.4 Qualimap/2.2.1-foss-2019b-R-3.6.2 QuPath/0.3.2-Java-11 R/4.2.0-foss-2021b R/3.6.2-foss-2019b R/4.1.0-foss-2021a R/4.1.2-foss-2021b R/4.0.0-foss-2020a R/3.6.2-fosscuda-2019b R/3.6.0-foss-2019a R/4.0.3-foss-2020b RNA-SeQC/1.1.8-foss-2019b-Java-11 RNAstructure/6.2-foss-2019b-Python-3.7.4 rstudio/1.2.5042-foss-2020a-Java-11-R-4.0.0 rstudio/1.3.959-foss-2020a-Java-11-R-4.0.0 rstudio/1.3.959-foss-2019b-R-3.6.2 rstudio/1.2.5033-fosscuda-2019b-R-3.6.2 rstudio/1.3.959-fosscuda-2019b-R-3.6.2 rstudio/1.2.5033-foss-2019b-R-3.6.2 RStudio-Server/1.4.1717-foss-2021a-Java-11-R-4.1.0 RStudio-Server/1.4.1717-foss-2021b-Java-11-R-4.2.0 RStudio-Server/1.4.1717-foss-2020b-Java-11-R-4.0.3 RStudio-Server/1.3.1093-foss-2021a-Java-11-R-4.1.0 RStudio-Server/1.3.1093-foss-2020b-Java-11-R-4.0.3 Scipion/3.0.12-foss-2021a-CUDA-11.3.1 snippy/4.6.0-foss-2019b-Perl-5.30.0 Spark/2.4.4-foss-2019a-Hadoop-2.7-Java-11-Python-3.7.2 Spark/3.1.1-foss-2020b Spark/3.1.1-fosscuda-2020b STAR-CCM+/17.02.008 Talairach/2.4.3 Trim_Galore/0.6.5-GCCcore-8.3.0-Java-11-Python-3.7.4 Trimmomatic/0.39-Java-11 Trinity/2.9.1-foss-2019b-Python-3.7.4 Trinity/2.9.1-foss-2019b-Python-2.7.16 WEKA/3.8.4-Java-11 Xmipp/3.22.07-Helios-foss-2021a-CUDA-11.3.1

Other Versions

These versions of Java are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 26th July 2021