phenoptrReports 0.3.0-foss-2021a-R-4.1.0

phenoptrReports generates reports and visualizations based on data created by Akoya Biosciences' inForm(R) software.

Accessing phenoptrReports 0.3.0-foss-2021a-R-4.1.0

To load the module for phenoptrReports 0.3.0-foss-2021a-R-4.1.0 please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load phenoptrReports/0.3.0-foss-2021a-R-4.1.0

BEAR Apps Version

2021a

Architectures

EL8-cascadelake — EL8-haswell — EL8-icelake — Ubuntu20.04-haswell

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

  • cpp11 0.4.1
  • formattable 0.2.1
  • mapproj 1.2.7
  • pals 1.7
  • phenoptr 0.3.1
  • phenoptrReports 0.3.0
  • rtree 7d12cd3
  • tzdb 0.2.0
  • UpSetR 1.4.0
  • vroom 1.5.7

More Information

For more information visit the phenoptrReports website.

Dependencies

This version of phenoptrReports has a direct dependency on: Boost/1.76.0-GCC-10.3.0 foss/2021a R/4.1.0-foss-2021a R-bundle-Bioconductor/3.13-foss-2021a-R-4.1.0 RStudio-Server/1.4.1717-foss-2021a-Java-11-R-4.1.0

Required By

This version of phenoptrReports is a direct dependent of: BEAR-R-bio/2021a-foss-2021a-R-4.1.0

Other Versions

These versions of phenoptrReports are available on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
0.2.6-foss-2019b-R-3.6.2 2019b

Last modified on 9th December 2021