CellChat 1.6.0-foss-2021b-R-4.2.0
There is a newer install of CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data.Accessing CellChat 1.6.0-foss-2021b-R-4.2.0
To load the module for CellChat 1.6.0-foss-2021b-R-4.2.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2021b
module load CellChat/1.6.0-foss-2021b-R-4.2.0
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
Extensions
- CellChat 1.6.0
- ggalluvial 0.12.3
- svglite 2.1.1
- systemfonts 1.0.4
More Information
For more information visit the CellChat website.
Dependencies
This version of CellChat has a direct dependency on: foss/2021b R/4.2.0-foss-2021b R-bundle-Bioconductor/3.15-foss-2021b-R-4.2.0
Required By
This version of CellChat is a direct dependent of: BEAR-R-bio/2021b-foss-2021b-R-4.2.0
Other Versions
These versions of CellChat are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Version | BEAR Apps Version |
---|---|
20210814-foss-2020a-R-4.0.0 | 2020a |
Last modified on 24th January 2023