CellChat 1.6.0-foss-2021b-R-4.2.0

There is a newer version of CellChat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data.

Accessing CellChat 1.6.0-foss-2021b-R-4.2.0

To load the module for CellChat 1.6.0-foss-2021b-R-4.2.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2021b
module load CellChat/1.6.0-foss-2021b-R-4.2.0

BEAR Apps Version

2021b

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

  • CellChat 1.6.0
  • ggalluvial 0.12.3
  • svglite 2.1.1
  • systemfonts 1.0.4

More Information

For more information visit the CellChat website.

Dependencies

This version of CellChat has a direct dependency on: foss/2021b R/4.2.0-foss-2021b R-bundle-Bioconductor/3.15-foss-2021b-R-4.2.0

Required By

This version of CellChat is a direct dependent of: BEAR-R-bio/2021b-foss-2021b-R-4.2.0

Other Versions

These versions of CellChat are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version BEAR Apps Version
20210814-foss-2020a-R-4.0.0 2020a

Last modified on 24th January 2023