prokka 1.14.5-gompi-2021b

Prokka is a software tool for the rapid annotation of prokaryotic genomes.

Accessing prokka 1.14.5-gompi-2021b

To load the module for prokka 1.14.5-gompi-2021b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2021b
module load prokka/1.14.5-gompi-2021b

BEAR Apps Version

2021b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the prokka website.

Dependencies

This version of prokka has a direct dependency on: BioPerl/1.7.8-GCCcore-11.2.0 Bio-SearchIO-hmmer/1.7.3-GCC-11.2.0 BLAST+/2.12.0-gompi-2021b gompi/2021b Java/11 libidn/1.38-GCCcore-11.2.0 parallel/20210722-GCCcore-11.2.0

Required By

This version of prokka is a direct dependent of: panaroo/1.3.2-foss-2021b

Other Versions

These versions of prokka are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 10th February 2023