lollipops 1.6.0

A simple 'lollipop' mutation diagram generator that tries to make things simple and easy by automating as much as possible. It uses the UniProt REST API and/or Pfam API to automate translation of Gene Symbols and lookup domain/motif features for display. If variant changes are provided, it will also annotate them to the diagram using the "lollipops" markers that give the tool it's name.

Accessing lollipops 1.6.0

To load the module for lollipops 1.6.0 please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022a
module load lollipops/1.6.0

BEAR Apps Version

2022a

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the lollipops website.

Last modified on 13th September 2023