mandrake 1.2.2-foss-2022a

Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding.

Accessing mandrake 1.2.2-foss-2022a

To load the module for mandrake 1.2.2-foss-2022a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022a
module load mandrake/1.2.2-foss-2022a

BEAR Apps Version

2022a

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

  • mandrake 1.2.2

More Information

For more information visit the mandrake website.

Dependencies

This version of mandrake has a direct dependency on: Boost/1.79.0-GCC-11.3.0 Eigen/3.4.0-GCCcore-11.3.0 FFmpeg/4.4.2-GCCcore-11.3.0 foss/2022a h5py/3.7.0-foss-2022a HDBSCAN/0.8.29-foss-2022a matplotlib/3.5.2-foss-2022a plotly.py/5.12.0-GCCcore-11.3.0 pp-sketchlib/2.1.1-foss-2022a pybind11/2.9.2-GCCcore-11.3.0 Python/3.10.4-GCCcore-11.3.0 scikit-learn/1.1.2-foss-2022a SciPy-bundle/2022.05-foss-2022a tqdm/4.64.0-GCCcore-11.3.0

Required By

This version of mandrake is a direct dependent of: poppunk/2.6.1-foss-2022a

Last modified on 15th November 2023