QuPath 0.4.4-Java-17
There is a newer install of QuPath
QuPath is open source software for bioimage analysis.Tools to annotate and view images, including whole slide & microscopy images Workflows for brightfield & fluorescence image analysis; New algorithms for common tasks, including cell segmentation, tissue microarray dearraying Interactive machine learning for both object & pixel classification; Customization, batch-processing & data interrogation by scripting; Easy integration with other tools, including ImageJAccessing QuPath 0.4.4-Java-17
To load the module for QuPath 0.4.4-Java-17 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2022b
module load QuPath/0.4.4-Java-17
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the QuPath website.
Dependencies
This version of QuPath has a direct dependency on: Groovy/4.0.15-Java-17 Java/17
Other Versions
These versions of QuPath are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Version | BEAR Apps Version |
---|---|
0.5.0-Java-17 | 2022a |
0.3.2-Java-11 | 2021b |
Last modified on 3rd October 2023