RUVSeq 1.34.0-foss-2022b-R-4.3.1

This package implements the remove unwanted variation (RUV) methods of Risso et al. (2014) for the normalization of RNA-Seq read counts between samples.

Accessing RUVSeq 1.34.0-foss-2022b-R-4.3.1

To load the module for RUVSeq 1.34.0-foss-2022b-R-4.3.1 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022b
module load RUVSeq/1.34.0-foss-2022b-R-4.3.1

BEAR Apps Version

2022b

Architectures

EL8-cascadelakeEL8-icelakeEL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

  • EDASeq 2.34.0
  • RUVSeq 1.34.0

More Information

For more information visit the RUVSeq website.

Dependencies

This version of RUVSeq has a direct dependency on: foss/2022b R/4.3.1-foss-2022b R-bundle-Bioconductor/3.17-foss-2022b-R-4.3.1

Required By

This version of RUVSeq is a direct dependent of: BEAR-R-bio/2022b-foss-2022b-R-4.3.1

Last modified on 18th March 2024