R 4.3.1-foss-2022b

R is a free software environment for statistical computing and graphics.

Accessing R 4.3.1-foss-2022b

To load the module for R 4.3.1-foss-2022b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022b
module load R/4.3.1-foss-2022b

BEAR Apps Version

2022b

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Plotting in R and X11 Errors

If you receive an error message unable to open connection to X11 display when generating plots then you should either:

• add options(bitmapType='cairo') before plotting
• or change the plot command to include type="cairo"

Extensions

• abc 2.2.1
• abc.data 1.0
• abe 3.0.1
• abind-1.4-5
• acepack 1.4.1
• adabag 5.0
• ade4-1.7-22
• ADGofTest 0.3
• admisc 0.33
• aggregation 1.0.1
• AICcmodavg-2.3-2
• akima-0.6-3.4
• alabama-2022.4-1
• AlgDesign 1.2.1
• alluvial-0.1-2
• AMAPVox 1.0.1
• animation 2.7
• aod 1.3.2
• apcluster 1.4.10
• ape-5.7-1
• aplot 0.1.10
• argparse 2.2.2
• aricode 1.0.2
• arm-1.13-1
• askpass 1.1
• asnipe 1.1.16
• assertive-0.3-6
• assertive.base-0.0-9
• assertive.code-0.0-4
• assertive.data-0.0-3
• assertive.data.uk-0.0-2
• assertive.data.us-0.0-2
• assertive.datetimes-0.0-3
• assertive.files-0.0-2
• assertive.matrices-0.0-2
• assertive.models-0.0-2
• assertive.numbers-0.0-2
• assertive.properties-0.0-5
• assertive.reflection-0.0-5
• assertive.sets-0.0-3
• assertive.strings-0.0-3
• assertive.types-0.0-3
• assertthat 0.2.1
• AUC 0.3.2
• audio-0.1-10
• aws-2.5-3
• awsMethods-1.1-1
• backports 1.4.1
• bacr 1.0.1
• bartMachine 1.3.4.1
• bartMachineJARs 1.2.1
• base
• base64 2.0.1
• base64enc-0.1-3
• BatchJobs 1.9
• batchmeans-1.0-4
• BayesianTools 0.1.8
• BayesLogit 2.1
• bayesm-3.1-5
• BayesPen 1.0
• bayesplot 1.10.0
• BB-2019.10-1
• BBmisc 1.13
• bbmle 1.0.25
• BCEE 1.3.1
• BDgraph 2.72
• bdsmatrix-1.3-6
• beanplot 1.3.1
• beeswarm 0.4.0
• berryFunctions 1.22.0
• betareg-3.1-4
• BH-1.81.0-1
• BiasedUrn 2.0.10
• bibtex 0.5.1
• bigD 0.2.0
• BIGL 1.8.0
• bigmemory 4.6.1
• bigmemory.sri 0.1.6
• bindr 0.1.1
• bindrcpp 0.2.2
• bio3d-2.4-4
• biom 0.3.12
• biomod2-4.2-4
• bit 4.0.5
• bit64 4.0.5
• bitops-1.0-7
• blavaan-0.4-8
• blob 1.2.4
• BMA 3.18.17
• bmp 0.3
• bnlearn 4.8.3
• bold 1.3.0
• boot-1.3-28.1
• bootstrap 2019.6
• Boruta 8.0.0
• brew-1.0-8
• brglm 0.7.2
• bridgedist 0.1.2
• bridgesampling-1.1-2
• brio 1.1.3
• brms 2.19.0
• Brobdingnag-1.2-9
• broom 1.0.5
• broom.helpers 1.13.0
• broom.mixed 0.2.9.4
• bslib 0.5.0
• bst-0.3-24
• cachem 1.0.8
• Cairo-1.6-0
• calibrate 1.7.7
• callr 3.7.3
• car-3.1-2
• carData-3.0-5
• caret-6.0-94
• catlearn 1.0
• caTools 1.18.2
• CBPS 0.23
• celestial 1.4.6
• cellranger 1.1.0
• cgdsr 1.3.0
• cghFLasso-0.2-1
• changepoint 2.2.4
• checkmate 2.2.0
• chemometrics 1.4.2
• chk 0.9.0
• chkptstanr 0.1.1
• chron-2.3-61
• circlize 0.4.15
• circular-0.4-95
• class-7.3-22
• classInt-0.4-9
• cld2 1.2.4
• cli 3.6.1
• clipr 0.8.0
• clisymbols 1.2.0
• clock 0.7.0
• clue-0.3-64
• cluster 2.1.4
• clusterGeneration 1.3.7
• clusterRepro 0.9
• clustree 0.5.0
• clValid 0.7
• cmprsk-2.2-11
• cNORM 3.0.3
• cobalt 4.5.1
• cobs-1.3-5
• coda-0.19-4
• codetools-0.2-19
• coin-1.4-2
• collapse 1.9.6
• colorspace-2.1-0
• colourpicker 1.2.0
• combinat-0.0-8
• ComICS 1.0.4
• commonmark 1.9.0
• compiler
• ComplexUpset 1.3.3
• compositions-2.0-6
• CompQuadForm 1.4.3
• conditionz 0.1.0
• conflicted 1.2.0
• conquer 1.3.3
• ConsRank 2.1.3
• contfrac-1.1-12
• copCAR-2.0-4
• copula-1.1-2
• corpcor 1.6.10
• corrplot 0.92
• covr 3.6.2
• CovSel 1.2.1
• covsim 1.0.0
• cowplot 1.1.1
• coxed 0.3.3
• coxme-2.2-18.1
• cpp11 0.4.4
• crayon 1.5.2
• credentials 1.3.2
• crfsuite 0.4.1
• crosstalk 1.2.0
• crul 1.4.0
• cSEM 0.5.0
• csSAM 1.2.4
• ctmle 0.1.2
• cubature 2.1.0
• cubelyr 1.0.2
• curl 5.0.1
• cvAUC 1.1.4
• CVST-0.2-3
• CVXR-1.0-11
• d3Network 0.5.2.1
• dagitty-0.3-1
• data.table 1.14.8
• data.tree 1.0.0
• DataCombine 0.2.21
• datasets
• date-1.2-42
• dbarts-0.9-23
• DBI 1.1.3
• dbplyr 2.3.3
• dbscan-1.1-11
• dcurver 0.9.2
• ddalpha 1.3.13
• deal-1.2-42
• debugme 1.1.0
• deldir-1.0-9
• dendextend 1.17.1
• DEoptim-2.2-8
• DEoptimR-1.0-14
• DepthProc 2.1.5
• Deriv 4.1.3
• desc 1.4.2
• DescTools 0.99.49
• deSolve 1.36
• devtools 2.4.5
• dfidx-0.0-5
• DHARMa 0.4.6
• dHSIC 2.1
• diagram 1.6.5
• DiagrammeR 1.0.10
• DiceKriging 1.6.0
• dichromat-2.0-0.1
• diffobj 0.3.5
• digest 0.6.33
• dimRed 0.2.6
• diptest-0.76-0
• DiscriMiner-0.1-29
• dismo-1.3-14
• distillery-1.2-1
• distr 2.9.2
• distrEx 2.9.0
• distributional 0.3.2
• DistributionUtils-0.6-0
• diveRsity 1.9.90
• dlm-1.1-6
• DMCfun 2.0.2
• doc2vec 0.2.0
• docstring 1.0.0
• doMC 1.3.8
• doParallel 1.0.17
• doRNG 1.8.6
• doSNOW 1.0.20
• dotCall64-1.0-2
• downlit 0.4.3
• downloader 0.4
• dplyr 1.1.2
• dr 3.0.10
• drgee 1.1.10
• DRR 0.0.4
• drugCombo 1.2.1
• DT 0.28
• dtangle 2.0.9
• dtplyr 1.3.1
• DTRreg 1.7
• dtw-1.23-1
• dummies 1.5.6
• dygraphs 1.1.1.6
• dynamicTreeCut-1.63-1
• e1071-1.7-13
• earth 5.3.2
• EasyABC 1.5.2
• ECOSolveR 0.5.5
• elementR 1.3.7
• ellipse 0.4.5
• ellipsis 0.3.2
• elliptic-1.4-0
• emdbook 1.3.13
• emmeans 1.8.7
• emoa-0.5-0.2
• emulator-1.2-21
• energy-1.7-11
• ENMeval 2.0.4
• entropy 1.3.1
• EnvStats 2.8.0
• epitools-0.5-10.1
• ergm 4.5.0
• ergm.count 4.1.1
• ergm.multi 0.2.0
• estimability 1.4.1
• evaluate 0.21
• EValue 4.1.3
• evd-2.3-6.1
• Exact 3.2
• expm-0.999-7
• ExPosition 2.8.23
• expsmooth 2.3
• extrafont 0.19
• extrafontdb 1.0
• extRemes-2.1-3
• FactoMineR 2.8
• FactorCopula 0.9.3
• fail 1.3
• fansi 1.0.4
• farver 2.1.1
• fastcluster 1.2.3
• fastDummies 1.7.3
• fasterize 1.0.4
• fastICA-1.2-3
• fastmap 1.1.1
• fastmatch-1.1-3
• fdrtool 1.2.17
• feather 0.3.5
• ff 4.0.9
• fftw-1.0-7
• fftwtools-0.9-11
• fields 14.1
• filehash-2.4-5
• finalfit 1.0.6
• findpython 1.0.8
• fishMod 0.29
• fitdistrplus-1.1-11
• FKSUM 1.0.1
• flashClust-1.01-2
• flexclust-1.4-1
• flexmix-2.3-19
• fma 2.5
• FME 1.3.6.3
• fmri 1.9.11
• FNN 1.1.3.2
• fontawesome 0.5.1
• forcats 1.0.0
• foreach 1.5.2
• forecast 8.21
• foreign-0.8-84
• formatR 1.14
• Formula-1.2-5
• formula.tools 1.7.1
• fossil 0.4.0
• fpc-2.2-10
• fpp 0.5
• fracdiff-1.5-2
• fs 1.6.2
• furrr 0.3.1
• futile.logger 1.4.3
• futile.options 1.0.1
• future 1.33.0
• future.apply 1.11.0
• gam-1.22-2
• gamlss-5.4-12
• gamlss.data-6.0-2
• gamlss.dist-6.0-5
• gamlss.tr-5.1-7
• gamm4-0.2-6
• gap-1.5-1
• gap.datasets 0.0.5
• gapfill-0.9.6-1
• gargle 1.5.1
• gaussquad-1.0-3
• gbm 2.1.8.1
• gbRd-0.4-11
• gclus 1.3.2
• gdalUtils 2.0.3.2
• gdata 2.19.0
• gdistance 1.6.4
• gee-4.13-25
• geeM 0.10.1
• geepack 1.3.9
• geex 1.1.1
• geiger 2.0.11
• GeneNet 1.2.16
• generics 0.1.3
• genoPlotR 0.8.11
• GenSA 1.1.8
• geojsonsf 2.0.3
• geometries 0.2.3
• geometry 0.4.7
• gert 1.9.2
• getopt 1.20.3
• GetoptLong 1.0.5
• GGally 2.1.2
• ggbeeswarm 0.7.2
• ggdag 0.2.10
• ggExtra 0.10.0
• ggfan 0.1.3
• ggforce 0.4.1
• ggformula 0.10.4
• ggfun 0.1.1
• ggh4x 0.2.4
• ggnetwork 0.5.12
• ggplot2 3.4.2
• ggplotify 0.1.1
• ggpubr 0.6.0
• ggraph 2.1.0
• ggrepel 0.9.3
• ggridges 0.5.4
• ggsci 3.0.0
• ggsignif 0.6.4
• ggstance 0.3.6
• ggvenn 0.1.10
• ggvis 0.4.8
• gh 1.4.0
• GillespieSSA 0.6.2
• git2r 0.32.0
• gitcreds 0.1.2
• GJRM-0.2-6.4
• glasso 1.11
• gld 2.6.6
• gllvm 1.4.1
• glmmML 1.1.4
• glmmTMB 1.1.7
• glmnet-4.1-7
• GlobalOptions 0.1.2
• globals 0.16.2
• glue 1.6.2
• gmm 1.8
• gmodels 2.18.1.1
• gmp-0.7-2
• gnumeric-0.7-8
• goftest-1.2-3
• gomms 1.0
• googledrive 2.1.1
• googlesheets4 1.1.1
• gower 1.0.1
• GPArotation-2023.3-1
• gplots 3.1.3
• graphics
• graphlayouts 1.0.0
• grDevices
• grf 2.3.0
• grid
• gridBase-0.4-7
• gridExtra 2.3
• gridGraphics-0.5-1
• grImport2-0.2-0
• grpreg 3.4.0
• GSA 1.03.2
• gsalib 2.2.1
• gsl-2.1-8
• gsw-1.1-1
• gt 0.9.0
• gtable 0.3.3
• gtools 3.9.4
• gtsummary 1.7.1
• GUTS 1.2.3
• gWidgets2-1.0-9
• gWidgets2tcltk-1.0-8
• GxEScanR 2.0.2
• h2o 3.40.0.4
• hal9001 0.4.3
• haldensify 0.2.3
• hardhat 1.3.0
• harmony 0.1.1
• hash 2.2.6.2
• haven 2.5.3
• hdf5r 1.3.8
• hdm 0.3.1
• heatmap3 1.1.9
• here 1.0.1
• hexbin 1.28.3
• HGNChelper 0.8.1
• HiddenMarkov-1.8-13
• highr 0.10
• Hmisc-5.1-0
• hms 1.1.3
• Hmsc-3.0-13
• htmlTable 2.4.1
• htmltools 0.5.5
• htmlwidgets 1.6.2
• httpcode 0.3.0
• httpuv 1.6.11
• httr 1.4.6
• httr2 0.2.3
• huge 1.3.5
• hunspell 3.0.2
• hwriter 1.3.2.1
• HWxtest 1.1.9
• hypergeo-1.2-13
• ica-1.0-3
• IDPmisc 1.1.20
• idr 1.3
• ids 1.0.1
• ie2misc 0.9.0
• igraph 1.5.0
• image.binarization 0.1.3
• imager 0.45.2
• imagerExtra 1.3.2
• ineq-0.2-13
• influenceR 0.1.5
• infotheo 1.2.0.1
• ini 0.3.1
• inline 0.3.19
• intergraph-2.0-2
• interp-1.1-4
• interpretR 0.2.4
• intrinsicDimension 1.2.0
• inum-1.0-5
• ipred-0.9-14
• irace 3.5
• irlba 2.3.5.1
• ismev 1.42
• Iso-0.0-18.1
• isoband 0.2.7
• ISOcodes 2022.09.29
• ISOweek-0.6-2
• iterators 1.0.14
• itertools-0.1-3
• JADE-2.0-3
• janeaustenr 1.0.0
• JBTools 0.7.2.9
• jiebaR 0.11
• jiebaRD 0.1
• jomo-2.7-6
• jpeg-0.1-10
• jquerylib 0.1.4
• jsonify 1.2.2
• jsonlite 1.8.7
• jstable 1.1.1
• juicyjuice 0.1.0
• kde1d 1.0.5
• kedd 1.0.3
• kernlab-0.9-32
• KernSmooth-2.23-21
• kinship2 1.9.6
• klaR-1.7-2
• knitr 1.43
• KODAMA 2.4
• kohonen 3.0.12
• ks 1.14.0
• labdsv-2.1-0
• labeling 0.4.2
• labelled 2.12.0
• laeken 0.5.2
• lambda.r 1.2.4
• LaplacesDemon 16.1.6
• lars 1.3
• lassosum 0.4.5
• later 1.3.1
• lattice-0.21-8
• latticeExtra-0.6-30
• lava 1.7.2.1
• lavaan-0.6-15
• lazy-1.2-18
• lazyeval 0.2.2
• LCFdata 2.0
• lda 1.4.2
• ldbounds 2.0.1
• leafem 0.2.0
• leaflet 2.1.2
• leaflet.providers 1.9.0
• leafsync 0.1.0
• leaps 3.1
• LearnBayes 2.15.1
• leiden 0.4.3
• lhs 1.1.6
• libcoin-1.0-9
• lifecycle 1.0.3
• limSolve 1.5.6
• linkcomm-1.0-14
• linprog-0.9-4
• liquidSVM 1.2.4
• listenv 0.9.0
• lme4-1.1-34
• LMERConvenienceFunctions 3.0
• lmerTest-3.1-3
• lmom 2.9
• Lmoments-1.3-1
• lmtest-0.9-40
• lobstr 1.1.2
• locfdr-1.1-8
• locfit-1.5-9.8
• logcondens 2.1.7
• logger 0.2.2
• logistf 1.25.0
• logspline 2.1.20
• longitudinal 1.1.13
• longmemo-1.1-2
• loo 2.6.0
• lpSolve 5.6.18
• lpSolveAPI-5.5.2.0-17.9
• lqa-1.0-3
• lsei-1.3-0
• lslx 0.6.11
• lubridate 1.9.2
• lwgeom-0.2-13
• magic-1.6-1
• magick 2.7.4
• magrittr 2.0.3
• MALDIquant 1.22.1
• manipulateWidget 0.11.1
• mapproj 1.2.11
• maps 3.4.1
• maptools-1.1-7
• markdown 1.7
• MASS-7.3-60
• Matching-4.10-8
• MatchIt 4.5.4
• mathjaxr-1.6-0
• matlab 1.0.4
• Matrix-1.6-0
• matrixcalc-1.0-6
• MatrixModels-0.5-1
• matrixStats 1.0.0
• maxLik-1.5-2
• maxlike-0.1-9
• maxnet 0.1.4
• mboost-2.9-7
• mclogit 0.9.6
• mclust 6.0.0
• mcmc-0.9-7
• MCMCpack-1.6-3
• mcmcse-1.5-0
• mda-0.5-4
• medflex-0.6-10
• mediation 4.5.0
• memisc 0.99.31.6
• memoise 2.0.1
• memuse-4.2-3
• MESS 0.5.9
• metadat-1.2-0
• metafor-4.2-0
• MetaUtility 2.1.2
• methods
• mets 1.3.2
• mgcv-1.8-42
• mgsub 1.7.3
• mhsmm 0.4.16
• mi 1.1
• mice 3.16.0
• miceadds-3.16-18
• microbenchmark 1.4.10
• MIIVsem 0.5.8
• mime 0.12
• minerva 1.5.10
• miniUI 0.1.1.1
• minpack.lm-1.2-3
• minqa 1.2.5
• mirt 1.39
• misc3d-0.9-1
• miscTools-0.6-28
• missForest 1.5
• mitml-0.4-5
• mitools 2.4
• mixtools 2.0.0
• mlbench-2.1-3.1
• mlegp 3.1.9
• MLmetrics 1.1.1
• mlogit-1.1-1
• mlr 2.19.1
• mlrMBO 1.1.5.1
• mltools 0.3.5
• mnormt 2.1.1
• ModelMetrics 1.2.2.2
• modelr 0.1.11
• modeltools-0.2-23
• momentfit 0.5
• moments 0.14.1
• MonteCarlo 1.0.6
• mosaicCore 0.9.2.1
• mpath-0.4-2.23
• mRMRe 2.1.2.1
• msm 1.7
• mstate 0.3.2
• multcomp-1.4-25
• multcompView-0.1-9
• multicool-0.1-12
• multipol-1.0-7
• munsell 0.5.0
• mvabund 4.2.1
• mvnfast 0.2.8
• mvtnorm-1.2-2
• nabor 0.5.0
• naniar 1.0.0
• natserv 1.0.0
• naturalsort 0.1.3
• ncbit 2013.03.29.1
• ncdf4 1.21
• NCmisc 1.2.0
• network 1.18.1
• networkDynamic 0.11.3
• networkLite 1.0.5
• neuralnet 1.44.2
• neuRosim-0.2-13
• ngspatial-1.2-2
• NISTunits 1.0.1
• nleqslv 3.3.4
• nlme-3.1-162
• nloptr 2.0.3
• NLP-0.2-1
• nlsem 0.8
• nnet-7.3-19
• nnls 1.4
• nonnest2-0.5-5
• nor1mix-1.3-0
• norm-1.0-11.1
• nortest-1.0-4
• np-0.60-17
• npsurv-0.5-0
• numDeriv-2016.8-1.1
• oai 0.4.0
• oce-1.8-1
• OceanView 1.0.6
• oddsratio 2.0.1
• openair-2.17-0
• OpenMx 2.21.8
• openssl 2.0.6
• openxlsx 4.2.5.2
• operator.tools 1.6.3
• optextras-2019-12.4
• optimParallel-1.0-2
• optimr-2019-12.16
• optimx-2022-4.30
• optmatch 0.10.6
• optparse 1.7.3
• ordinal-2022.11-16
• origami 1.0.7
• oro.nifti 0.11.4
• orthopolynom-1.0-6.1
• osqp 0.6.0.8
• outliers 0.15
• packrat 0.9.1
• pacman 0.5.1
• pammtools 0.5.91
• pamr 1.56.1
• pan 1.8
• parallel
• parallelDist 0.2.6
• parallelly 1.36.0
• parallelMap 1.5.1
• ParamHelpers 1.14.1
• parsedate 1.3.1
• party-1.3-13
• partykit-1.2-20
• pastecs 1.3.21
• patchwork 1.1.2
• pbapply-1.7-2
• pbivnorm 0.6.0
• pbkrtest 0.5.2
• PCAmatchR 0.3.3
• pcaPP-2.0-3
• pdp 0.8.1
• PearsonDS 1.2.4
• pec 2023.04.12
• penalized-0.9-52
• penfa 0.1.1
• peperr 1.5
• PermAlgo 1.2
• permute-0.9-7
• phangorn 2.11.1
• pheatmap 1.0.12
• phylobase 0.8.10
• phytools-1.5-1
• pillar 1.9.0
• pim 2.0.2
• pinfsc50 1.2.0
• pixmap-0.4-12
• pkgbuild 1.4.2
• pkgconfig 2.0.3
• pkgdown 2.0.7
• pkgload 1.3.2.1
• pkgmaker 0.32.10
• plogr 0.2.0
• plot3D 1.4
• plot3Drgl 1.0.4
• plotly 4.10.2
• plotmo 3.6.2
• plotrix-3.8-2
• pls-2.8-2
• plyr 1.8.8
• PMA 1.2.1
• png-0.1-8
• PoissonSeq 1.1.2
• poLCA 1.6.0.1
• polspline 1.1.23
• Polychrome 1.5.1
• polyclip-1.10-4
• polycor-0.8-1
• polynom-1.4-1
• posterior 1.4.1
• ppcor 1.1
• prabclus-2.3-2
• pracma 2.4.2
• praise 1.0.0
• PresenceAbsence 1.1.11
• preseqR 4.0.0
• prettyGraphs 2.1.6
• prettyunits 1.1.1
• princurve 2.1.6
• pROC 1.18.4
• processx 3.8.2
• prodlim 2023.03.31
• profileModel 0.6.1
• proftools-0.99-3
• profvis 0.3.8
• progress 1.2.2
• progressr 0.13.0
• projpred 2.6.0
• promises 1.2.0.1
• proto 1.0.0
• proxy-0.4-27
• proxyC 0.3.3
• pryr 0.1.6
• ps 1.7.5
• pscl 1.5.5.1
• pspline-1.0-19
• psych 2.3.6
• Publish 2023.01.17
• pulsar 0.3.10
• purrr 1.0.1
• pvclust-2.2-0
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• qgraph 1.9.5
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• qrnn 2.1
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• R.cache 0.16.0
• R.matlab 3.7.0
• R.methodsS3 1.8.2
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• R.rsp 0.45.0
• R.utils 2.12.2
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• R6 2.5.1
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• randomForest-4.7-1.1
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• rappdirs 0.3.3
• rARPACK-0.11-0
• raster-3.6-23
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• RBesT-1.6-7
• rbibutils 2.2.13
• rbison 1.0.0
• Rborist-0.3-2
• RCAL 2.0
• Rcgmin-2022-4.30
• RCircos 1.2.2
• rcmdcheck 1.4.0
• RColorBrewer-1.1-3
• Rcpp 1.0.11
• RcppArmadillo 0.12.4.1.0
• RcppEigen 0.3.3.9.3
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• Rdpack 2.4
• rdrop2 0.8.2.1
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• reactR 0.4.4
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• reader 1.0.6
• readODS 1.8.0
• readr 2.1.4
• readxl 1.4.3
• rebird 1.3.0
• recipes 1.0.6
• RefFreeEWAS 2.2
• registry-0.5-1
• regsem 1.9.5
• relsurv-2.2-9
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• rematch2 2.1.2
• remotes 2.4.2
• rentrez 1.2.3
• renv 1.0.0
• reprex 2.0.2
• resample 0.6
• reshape 0.8.9
• reshape2 1.4.4
• reticulate 1.30
• rex 1.2.1
• rgbif 3.7.7
• RGCCA 3.0.1
• rgdal-1.6-7
• rgeos-0.6-3
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• rgl 1.2.1
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• RhpcBLASctl-0.23-42
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• RInside 0.2.18
• rio 0.5.29
• riskRegression 2023.03.22
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• RItools-0.3-3
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• rmarkdown 2.23
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• rms-6.7-0
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• rncl 0.8.7
• rnetcarto 0.2.6
• RNeXML 2.4.11
• rngtools 1.5.2
• rngWELL-0.10-9
• RNifti 1.5.0
• robustbase-0.99-0
• ROCR-1.0-11
• ROI-1.0-1
• ROI.plugin.glpk-1.0-0
• Rook 1.2
• rootSolve 1.8.2.3
• roptim 0.1.6
• rotl 3.1.0
• roxygen2 7.2.3
• rpact 3.4.0
• rpart 4.1.19
• rpf 1.0.11
• RPMM 1.25
• rprojroot 2.0.3
• rrcov-1.7-4
• rredlist 0.7.1
• rsample 1.1.1
• rsconnect 0.8.29
• Rserve-1.8-11
• RSNNS-0.4-16
• Rsolnp 1.16
• RSpectra-0.16-1
• RSQLite 2.3.1
• Rssa 1.0.5
• rstan 2.21.8
• rstantools 2.3.1
• rstatix 0.7.2
• rstudioapi 0.15.0
• rtdists-0.11-5
• Rtsne 0.16
• Rttf2pt1 1.3.12
• RUnit 0.4.32
• ruv 0.9.7.1
• rversions 2.1.2
• rvertnet 0.8.2
• rvest 1.0.3
• rvinecopulib 0.6.3.1.1
• Rvmmin-2018-4.17.1
• RWeka-0.4-46
• RWekajars-3.9.3-2
• s2 1.1.4
• sampling 2.9
• sandwich-3.0-2
• sass 0.4.6
• SBdecomp 1.2
• scales 1.2.1
• scam-1.2-14
• scatterpie 0.2.1
• scatterplot3d-0.3-44
• scs 3.2.4
• sctransform 0.3.5
• SDMTools-1.1-221.2
• seewave 2.2.0
• segmented-1.6-4
• selectr-0.4-2
• sem-3.1-15
• semPLS-1.0-10
• semTools-0.5-6
• sendmailR-1.4-0
• sensemakr 0.1.4
• sentometrics 1.0.0
• seqinr-4.2-30
• servr 0.27
• sessioninfo 1.2.2
• setRNG-2022.4-1
• sf-1.0-13
• sfheaders 0.4.3
• sfsmisc-1.1-15
• shadowtext 0.1.2
• shape 1.4.6
• shapefiles 0.7.2
• shiny 1.7.4.1
• shinycssloaders 1.0.0
• shinydashboard 0.7.2
• shinyjs 2.1.0
• shinystan 2.6.0
• shinythemes 1.2.0
• signal-0.7-7
• SignifReg 4.3
• simex 1.8
• SimSeq 1.4.0
• SKAT 2.2.5
• slam-0.1-50
• slider 0.3.0
• sm-2.2-5.7.1
• smoof 1.6.0.3
• smoother 1.1
• sn 2.1.1
• sna-2.7-1
• SNFtool 2.3.1
• snow-0.4-4
• SnowballC 0.7.1
• snowfall-1.84-6.2
• SOAR-0.99-11
• solrium 1.2.0
• som-0.3-5.1
• soundecology 1.3.3
• sourcetools-0.1.7-1
• sp-2.0-0
• spaa 0.2.2
• spam-2.9-1
• spaMM 4.3.20
• SparseM 1.81
• SPAtest 3.1.2
• spatial-7.3-16
• spatstat-3.0-6
• spatstat.core-2.4-4
• spatstat.data-3.0-1
• spatstat.explore-3.2-1
• spatstat.geom-3.2-2
• spatstat.linnet-3.1-1
• spatstat.model-3.2-4
• spatstat.random-3.1-5
• spatstat.sparse-3.0-2
• spatstat.utils-3.0-3
• spData 2.3.0
• splines
• splitstackshape 1.4.8
• spls-2.2-3
• spocc 1.2.2
• spThin 0.2.0
• SQUAREM 2021.1
• stabledist-0.7-1
• stabs-0.6-4
• StanHeaders 2.26.27
• stargazer 5.2.3
• stars-0.6-1
• startupmsg 0.9.6
• StatMatch 1.4.1
• statmod 1.5.0
• statnet 2019.6
• statnet.common 4.9.0
• stats
• stats4
• stdReg 3.4.1
• stopwords 2.3
• stringdist 0.9.10
• stringi 1.7.12
• stringr 1.5.0
• strucchange-1.5-3
• styler 1.10.1
• subplex 1.8
• SuperLearner-2.0-28
• SuppDists-1.1-9.7
• survey-4.2-1
• survival-3.5-5
• survivalROC 1.0.3.1
• svd 0.5.4
• svglite 2.1.1
• swagger 3.33.1
• symmoments 1.2.1
• sys 3.4.2
• systemfonts 1.0.4
• tableone 0.13.2
• tau-0.0-24
• taxize 0.9.100
• tcltk
• tcltk2-1.2-11
• tclust-1.5-4
• TeachingDemos 2.12
• tensor 1.5
• tensorA 0.36.2
• tergm 4.2.0
• terra-1.7-39
• testit 0.13
• testthat 3.1.10
• textcat-1.0-8
• textplot 0.2.2
• textshaping 0.3.6
• TFisher 0.2.0
• TH.data-1.1-2
• threejs 0.3.3
• tibble 3.2.1
• tictoc 1.2
• tidygraph 1.2.3
• tidyr 1.3.0
• tidyselect 1.2.0
• tidytext 0.4.1
• tidytree 0.4.2
• tidyverse 2.0.0
• tiff-0.1-11
• timechange 0.2.0
• timeDate 4022.108
• timereg 2.0.5
• tinytex 0.45
• tkrplot-0.0-27
• tm-0.7-11
• tmap-3.3-3
• tmaptools-3.1-1
• TMB 1.9.4
• tmle 1.5.0.2
• tmvnsim-1.0-2
• tmvtnorm 1.5
• tokenizers 0.3.0
• tools
• topicmodels-0.2-14
• TraMineR-2.2-7
• tree-1.0-43
• triebeard 0.4.1
• trimcluster-0.1-5
• tripack-1.3-9.1
• TruncatedNormal 2.2.2
• truncnorm-1.0-9
• trust-0.1-8
• tseries-0.10-54
• tseriesChaos-0.1-13.1
• tsna 0.3.5
• tsne-0.1-3.1
• TTR 0.24.3
• tuneR 1.4.4
• twang 2.5
• tweedie 2.3.5
• tweenr 2.0.2
• tzdb 0.4.0
• ucminf 1.2.0
• udpipe 0.8.11
• umap 0.2.10.0
• unbalanced 2.0
• unikn 0.8.0
• uniqueAtomMat-0.1-3-2
• units-0.8-2
• unmarked 1.3.2
• UpSetR 1.4.0
• urca-1.3-3
• urlchecker 1.0.1
• urltools 1.7.3
• uroot-2.1-2
• usethis 2.2.2
• utf8 1.2.3
• utils
• uuid-1.1-0
• V8 4.3.1
• varhandle 2.0.5
• vcd-1.4-11
• vcfR 1.14.0
• vctrs 0.6.3
• vegan-2.6-4
• VennDiagram 1.7.3
• VGAM-1.1-8
• VIM 6.2.2
• VineCopula 2.4.5
• vioplot 0.4.0
• vipor 0.4.5
• viridis 0.6.3
• viridisLite 0.4.2
• visdat 0.6.0
• visNetwork 2.1.2
• vroom 1.6.3
• VSURF 1.2.0
• waldo 0.5.1
• warp 0.2.0
• waveslim 1.8.4
• wdm 0.2.3
• webshot 0.5.5
• webutils 1.1
• weights 1.0.4
• WeightSVM-1.7-11
• wellknown 0.7.4
• whisker 0.4.1
• widgetframe 0.3.1
• WikidataQueryServiceR 1.0.0
• WikidataR 2.3.3
• WikipediR 1.5.0
• wikitaxa 0.4.0
• withr 2.5.0
• wk 0.7.3
• word2vec 0.3.4
• wordcloud 2.6
• worrms 0.4.3
• WriteXLS 6.4.0
• xfun 0.39
• xgboost 1.7.5.1
• xlsx 0.6.5
• xlsxjars 0.6.1
• XML-3.99-0.14
• xml2 1.3.5
• xopen 1.0.0
• xtable-1.8-4
• xts 0.13.1
• yaImpute-1.0-33
• yaml 2.3.7
• yulab.utils 0.0.6
• zeallot 0.1.0
• zip 2.3.0
• zoo-1.8-12

More Information

For more information visit the R website.

Dependencies

This version of R has a direct dependency on: bzip2/1.0.8-GCCcore-12.2.0 cairo/1.17.4-GCCcore-12.2.0 cURL/7.86.0-GCCcore-12.2.0 FFTW/3.3.10-GCC-12.2.0 foss/2022b GDAL/3.6.2-foss-2022b GLPK/5.0-GCCcore-12.2.0 GMP/6.2.1-GCCcore-12.2.0 GSL/2.7-GCCcore-12.2.0 HDF5/1.14.0-gompi-2022b ICU/72.1-GCCcore-12.2.0 ImageMagick/7.1.0-53-GCCcore-12.2.0 Java/11 libgit2/1.5.0-GCCcore-12.2.0 libGLU/9.0.2-GCCcore-12.2.0 libjpeg-turbo/2.1.4-GCCcore-12.2.0 libpng/1.6.38-GCCcore-12.2.0 libreadline/8.2-GCCcore-12.2.0 libsndfile/1.2.0-GCCcore-12.2.0 LibTIFF/4.4.0-GCCcore-12.2.0 libxml2/2.10.3-GCCcore-12.2.0 Mesa/22.2.4-GCCcore-12.2.0 MPFR/4.2.0-GCCcore-12.2.0 ncurses/6.3-GCCcore-12.2.0 NLopt/2.7.1-GCCcore-12.2.0 nodejs/18.12.1-GCCcore-12.2.0 OpenSSL/1.1 PCRE2/10.40-GCCcore-12.2.0 SQLite/3.39.4-GCCcore-12.2.0 Tk/8.6.12-GCCcore-12.2.0 UDUNITS/2.2.28-GCCcore-12.2.0 X11/20221110-GCCcore-12.2.0 XZ/5.2.7-GCCcore-12.2.0 zlib/1.2.12-GCCcore-12.2.0

Required By

This version of R is a direct dependent of: AdmixTools/7.0.2-foss-2022b-R-4.3.1-Perl-5.36.0 arrow-R/11.0.0.3-foss-2022b-R-4.3.1 ASCAT/3.1.2-foss-2022b-R-4.3.1 BAT/2.9.5-foss-2022b-R-4.3.1 Battenberg/2.2.9-foss-2022b-R-4.3.1 BEAR-R-bio/2022b-foss-2022b-R-4.3.1 BUSCO/5.4.7-foss-2022b celldex/1.10.1-foss-2022b-R-4.3.1 faahKO/1.40.0-foss-2022b-R-4.3.1 flowTrans/1.52.0-foss-2022b-R-4.3.1 ggfortify/0.4.16-foss-2022b-R-4.3.1 hdWGCNA/20240201-foss-2022b-R-4.3.1 hypervolume/3.1.3-foss-2022b-R-4.3.1 iRF/3.0.0-foss-2022b-R-4.3.1 IRkernel/1.3.2-foss-2022b-R-4.3.1 maftools/2.16.0-foss-2022b-R-4.3.1 MAST/1.26.0-foss-2022b-R-4.3.1 mgcv/1.9-1-foss-2022b-R-4.3.1 MOFA2/1.10.0-foss-2022b-R-4.3.1 monocle/2.28.0-foss-2022b-R-4.3.1 msPurity/1.26.0-foss-2022b-R-4.3.1 MSstats/4.8.6-foss-2022b-R-4.3.1 ottr/1.4.0-foss-2022b-R-4.3.1 pandaR/1.32.0-foss-2022b-R-4.3.1 phytools/2.0-3-foss-2022b-R-4.3.1 R-bundle-Bioconductor/3.17-foss-2022b-R-4.3.1 RSEM/1.3.3-foss-2022b RUVSeq/1.34.0-foss-2022b-R-4.3.1 SDMtune/1.3.1-foss-2022b-R-4.3.1 sequenza/3.0.0-foss-2022b sequenza-utils/3.0.0-foss-2022b Seurat/5.0.0-foss-2022b-R-4.3.1 smotefamily/1.3.1-foss-2022b-R-4.3.1

Other Versions

These versions of R are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 19th July 2023