SEPP 4.5.1-foss-2022b
SATe-enabled Phylogenetic Placement - addresses the problem of phylogenetic placement of short reads into reference alignments and trees.Accessing SEPP 4.5.1-foss-2022b
To load the module for SEPP 4.5.1-foss-2022b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2022b
module load SEPP/4.5.1-foss-2022b
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the SEPP website.
Dependencies
This version of SEPP has a direct dependency on: DendroPy/4.5.2-GCCcore-12.2.0 foss/2022b Python/3.10.8-GCCcore-12.2.0
Required By
This version of SEPP is a direct dependent of: BUSCO/5.4.7-foss-2022b
Other Versions
These versions of SEPP are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 4.5.1-foss-2021b | 2021b |
| 4.3.10-foss-2019b-Python-3.7.4 | 2019b |
Last modified on 16th January 2024