prodigal 2.6.3-GCCcore-12.3.0

There is a newer install of prodigal

Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and the University of Tennessee.

Accessing prodigal 2.6.3-GCCcore-12.3.0

To load the module for prodigal 2.6.3-GCCcore-12.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2023a module load prodigal/2.6.3-GCCcore-12.3.0

BEAR Apps Version

2023a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two parts: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the prodigal website.

Dependencies

This version of prodigal has a direct dependency on: GCCcore/12.3.0

Required By

This version of prodigal is a direct dependent of: CheckM/1.0.18-foss-2023a-Python-2.7.18 SemiBin/2.1.0-foss-2023a-CUDA-12.1.1 SemiBin/2.1.0-foss-2023a

Other Versions

These versions of prodigal are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Version	BEAR Apps Version
2.6.3-GCCcore-8.3.0	2019b
2.6.3-GCCcore-12.2.0	2022b
2.6.3-GCCcore-11.3.0	2022a
2.6.3-GCCcore-11.2.0	2021b
2.6.3-GCCcore-10.3.0	2021a

Last modified on 4th March 2025