Bowtie 1.2.2-foss-2018b
Deprecated: Use of this version of Bowtie is deprecated. More information on our Applications Support and Retention Policy.
There is a newer install of Bowtie
Bowtie is an ultrafast, memory-efficient short read aligner. It aligns short DNA sequences (reads) to the human genome.Accessing Bowtie 1.2.2-foss-2018b
To load the module for Bowtie 1.2.2-foss-2018b please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load Bowtie/1.2.2-foss-2018b
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the Bowtie website.
Dependencies
This version of Bowtie has a direct dependency on: foss/2018b tbb/2018_U5-GCCcore-7.3.0 zlib/1.2.11-GCCcore-7.3.0
Required By
This version of Bowtie is a direct dependent of: Trinity/2.8.4-foss-2018b
Other Versions
These versions of Bowtie are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 1.3.1-GCC-12.2.0 | 2022b |
| 1.3.1-GCC-11.3.0 | 2022a |
| 1.2.3-GCC-8.3.0 | 2019b |
Last modified on 3rd June 2019