scikit-bio 0.5.7-foss-2021b

scikit-bio is an open-source, BSD-licensed Python 3 package providing data structures, algorithms and educational resources for bioinformatics.

Accessing scikit-bio 0.5.7-foss-2021b

To load the module for scikit-bio 0.5.7-foss-2021b please use this command on the BEAR systems (BlueBEAR, BEARCloud VMs, and CaStLeS VMs):

module load bear-apps/2021b
module load scikit-bio/0.5.7-foss-2021b

BEAR Apps Version

2021b

Architectures

EL8-cascadelake — EL8-haswell — EL8-icelake

The listed architectures consist of two part: OS-CPU.

  • BlueBEAR: The OS used on BlueBEAR is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
  • BEAR and CaStLeS Cloud VMs: These VMs can have one of two OSes. Those with access to a BEAR Cloud or CaStLeS VM should check that the listed architectures for an application include the OS of VM being used. The VMs, irrespective of OS, will use the haswell CPU type.

Extensions

  • CacheControl 0.12.11
  • decorator 5.1.1
  • hdmedians 0.14.2
  • lockfile 0.12.2
  • msgpack 1.0.4
  • natsort 8.1.0
  • scikit-bio-0.5.7

More Information

For more information visit the scikit-bio website.

Dependencies

This version of scikit-bio has a direct dependency on: foss/2021b h5py/3.6.0-foss-2021b IPython/7.26.0-GCCcore-11.2.0 matplotlib/3.4.3-foss-2021b Python/3.9.6-GCCcore-11.2.0 scikit-learn/1.0.1-foss-2021b SciPy-bundle/2021.10-foss-2021b

Required By

This version of scikit-bio is a direct dependent of: DRAM/1.3.6-foss-2021b scCODA/0.1.8-foss-2021b

Last modified on 25th August 2022