ABRicate 1.0.0-gompi-2022a

Mass screening of contigs for antimicrobial and virulence genes

Accessing ABRicate 1.0.0-gompi-2022a

To load the module for ABRicate 1.0.0-gompi-2022a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022a
module load ABRicate/1.0.0-gompi-2022a

BEAR Apps Version

2022a

Architectures

EL8-cascadelake — EL8-icelake — EL8-sapphirerapids

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

More Information

For more information visit the ABRicate website.

Dependencies

This version of ABRicate has a direct dependency on: any2fasta/0.4.2-GCCcore-11.3.0 BioPerl/1.7.8-GCCcore-11.3.0 BLAST+/2.13.0-gompi-2022a gompi/2022a Perl/5.34.1-GCCcore-11.3.0

Last modified on 18th January 2024