BioPerl 1.7.8-GCCcore-11.3.0

Bioperl is the product of a community effort to produce Perl code which is useful in biology. Examples include Sequence objects, Alignment objects and database searching objects.

Accessing BioPerl 1.7.8-GCCcore-11.3.0

To load the module for BioPerl 1.7.8-GCCcore-11.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):

📋 module load bear-apps/2022a
module load BioPerl/1.7.8-GCCcore-11.3.0

BEAR Apps Version




The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.


  • Bio::DB::SeqFeature 1.7.4
  • Bio::Procedural 1.7.4
  • BioPerl 1.7.8
  • XML::DOM::XPath 0.14
  • XML::Writer 0.900

More Information

For more information visit the BioPerl website.


This version of BioPerl has a direct dependency on: DB_File/1.858-GCCcore-11.3.0 GCCcore/11.3.0 Perl/5.34.1-GCCcore-11.3.0 XML-LibXML/2.0207-GCCcore-11.3.0

Required By

This version of BioPerl is a direct dependent of: ABRicate/1.0.0-gompi-2022a Bio-DB-HTS/3.01-GCC-11.3.0 VEP/107-GCC-11.3.0

Other Versions

These versions of BioPerl are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 19th October 2023