Perl 5.34.1-GCCcore-11.3.0
There is a newer install of Perl
Larry Wall's Practical Extraction and Report LanguageAccessing Perl 5.34.1-GCCcore-11.3.0
To load the module for Perl 5.34.1-GCCcore-11.3.0 please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2022a
module load Perl/5.34.1-GCCcore-11.3.0
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-icelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
Extensions
- Algorithm::Dependency 1.112
- Algorithm::Diff 1.201
- aliased 0.34
- AnyEvent 7.17
- App::Cmd 0.334
- App::cpanminus 1.7046
- AppConfig 1.71
- Archive::Extract 0.88
- Array::Transpose 0.06
- Array::Utils 0.5
- Authen::NTLM 1.09
- Authen::SASL 2.16
- AutoLoader 5.74
- B::Hooks::EndOfScope 0.26
- B::Lint 1.20
- boolean 0.46
- Business::ISBN 3.007
- Business::ISBN::Data 20210112.006
- Canary::Stability 2013
- Capture::Tiny 0.48
- Carp 1.50
- Carp::Clan 6.08
- Carp::Heavy 1.50
- Class::Accessor 0.51
- Class::Data::Inheritable 0.09
- Class::DBI v3.0.17
- Class::DBI::SQLite 0.11
- Class::Inspector 1.36
- Class::ISA 0.36
- Class::Load 0.25
- Class::Load::XS 0.10
- Class::Singleton 1.6
- Class::Tiny 1.008
- Class::Trigger 0.15
- Clone 0.45
- Clone::Choose 0.010
- common::sense 3.75
- Config::General 2.65
- Config::INI 0.027
- Config::MVP 2.200012
- Config::Simple 4.58
- Config::Tiny 2.28
- constant 1.33
- CPAN::Meta::Check 0.014
- CPANPLUS 0.9914
- Crypt::DES 2.07
- Crypt::Rijndael 1.16
- Cwd 3.75
- Cwd::Guard 0.05
- Data::Dump 1.25
- Data::Dumper 2.183
- Data::Dumper::Concise 2.023
- Data::Grove 0.08
- Data::OptList 0.112
- Data::Section 0.200007
- Data::Section::Simple 0.07
- Data::Stag 0.14
- Data::Types 0.17
- Data::UUID 1.226
- Date::Handler 1.2
- Date::Language 2.33
- DateTime 1.58
- DateTime::Locale 1.35
- DateTime::TimeZone 2.52
- DateTime::Tiny 1.07
- DBD::CSV 0.59
- DBD::SQLite 1.70
- DBI 1.643
- DBIx::Admin::TableInfo 3.04
- DBIx::ContextualFetch 1.03
- DBIx::Simple 1.37
- Devel::CheckCompiler 0.07
- Devel::CheckLib 1.14
- Devel::Cycle 1.12
- Devel::GlobalDestruction 0.14
- Devel::OverloadInfo 0.007
- Devel::StackTrace 2.04
- Digest::HMAC 1.04
- Digest::MD5::File 0.08
- Digest::SHA1 2.13
- Dist::CheckConflicts 0.11
- Dist::Zilla 6.024
- Email::Date::Format 1.005
- Encode 3.17
- Encode::Locale 1.05
- Error 0.17029
- Eval::Closure 0.14
- Exception::Class 1.45
- Expect 1.35
- Exporter 5.74
- Exporter::Declare 0.114
- Exporter::Tiny 1.002002
- ExtUtils::CBuilder 0.280236
- ExtUtils::Config 0.008
- ExtUtils::Constant 0.25
- ExtUtils::CppGuess 0.26
- ExtUtils::Helpers 0.026
- ExtUtils::InstallPaths 0.012
- ExtUtils::MakeMaker 7.64
- ExtUtils::ParseXS 3.44
- Fennec::Lite 0.004
- File::CheckTree 4.42
- File::Copy::Recursive 0.45
- File::Copy::Recursive::Reduced 0.006
- File::Find::Rule 0.34
- File::Find::Rule::Perl 1.16
- File::Grep 0.02
- File::HomeDir 1.006
- File::Listing 6.15
- File::Next 1.18
- File::Path 2.18
- File::pushd 1.016
- File::Remove 1.60
- File::ShareDir 1.118
- File::ShareDir::Install 0.13
- File::Slurp 9999.32
- File::Slurp::Tiny 0.004
- File::Slurper 0.013
- File::Spec 3.75
- File::Temp 0.2311
- File::Which 1.27
- Font::TTF 1.06
- Getopt::Long 2.52
- Getopt::Long::Descriptive 0.110
- Git 0.42
- GO 0.04
- GO::Utils 0.15
- Graph 0.9725
- Graph::ReadWrite 2.10
- Hash::Merge 0.302
- Heap 0.80
- HTML::Entities::Interpolate 1.10
- HTML::Form 6.07
- HTML::Parser 3.78
- HTML::Tagset 3.20
- HTML::Template 2.97
- HTML::Tree 5.07
- HTTP::Cookies 6.10
- HTTP::Daemon 6.14
- HTTP::Date 6.05
- HTTP::Negotiate 6.01
- HTTP::Request 6.36
- HTTP::Tiny 0.080
- if 0.0608
- Ima::DBI 0.35
- Import::Into 1.002005
- Importer 0.026
- Inline 0.86
- IO::Compress::Bzip2 2.106
- IO::HTML 1.004
- IO::Socket::SSL 2.074
- IO::String 1.08
- IO::Stringy 2.113
- IO::Tty 1.16
- IPC::Cmd 1.04
- IPC::Run 20200505.0
- IPC::Run3 0.048
- IPC::System::Simple 1.30
- JSON 4.05
- JSON::XS 4.03
- Lingua::EN::PluralToSingular 0.21
- List::AllUtils 0.19
- List::MoreUtils 0.430
- List::MoreUtils::XS 0.430
- List::SomeUtils 0.58
- List::Util 1.62
- List::UtilsBy 0.11
- local::lib 2.000029
- Locale::Maketext::Simple 0.21
- Log::Dispatch 2.70
- Log::Dispatchouli 2.023
- Log::Handler 0.90
- Log::Log4perl 1.54
- Log::Message 0.08
- Log::Message::Simple 0.10
- Log::Report 1.33
- Log::Report::Optional 1.07
- Logger::Simple 2.0
- LWP::MediaTypes 6.04
- LWP::Protocol::https 6.10
- LWP::Simple 6.55
- Mail::Util 2.21
- Math::Bezier 0.01
- Math::CDF 0.1
- Math::Round 0.07
- Math::VecStat 0.08
- MCE::Mutex 1.878
- Meta::Builder 0.004
- MIME::Base64 3.16
- MIME::Charset 1.012.2
- MIME::Lite 3.033
- MIME::Types 2.22
- Mixin::Linewise::Readers 0.110
- Mock::Quick 1.111
- Module::Build 0.4231
- Module::Build::Tiny 0.039
- Module::Build::XSUtil 0.19
- Module::CoreList 5.20220420
- Module::Implementation 0.09
- Module::Install 1.19
- Module::Load 0.36
- Module::Load::Conditional 0.74
- Module::Metadata 1.000037
- Module::Path 0.19
- Module::Pluggable 5.2
- Module::Runtime 0.016
- Module::Runtime::Conflicts 0.003
- Moo 2.005004
- Moose 2.2201
- MooseX::LazyRequire 0.11
- MooseX::OneArgNew 0.005
- MooseX::Role::Parameterized 1.11
- MooseX::SetOnce 0.201
- MooseX::Types 0.50
- MooseX::Types::Perl 0.101343
- Mouse v2.5.10
- Mozilla::CA 20211001
- MRO::Compat 0.15
- namespace::autoclean 0.29
- namespace::clean 0.27
- Net::Domain 3.13
- Net::HTTP 6.22
- Net::SMTP::SSL 1.04
- Net::SNMP v6.0.1
- Net::SSLeay 1.92
- Number::Compare 0.03
- Number::Format 1.75
- Object::Accessor 0.48
- Object::InsideOut 4.05
- Package::Constants 0.06
- Package::DeprecationManager 0.17
- Package::Stash 0.40
- Package::Stash::XS 0.29
- PadWalker 2.5
- Parallel::ForkManager 2.02
- Params::Check 0.38
- Params::Util 1.102
- Params::Validate 1.30
- Params::ValidationCompiler 0.30
- parent 0.238
- Parse::RecDescent 1.967015
- Path::Tiny 0.122
- PDF::API2 2.043
- Perl::OSType 1.010
- PerlIO::utf8_strict 0.009
- Pod::Elemental 0.103005
- Pod::Escapes 1.07
- Pod::Eventual 0.094002
- Pod::LaTeX 0.61
- Pod::Man 4.14
- Pod::Plainer 1.04
- Pod::POM 2.01
- Pod::Simple 3.43
- Pod::Weaver 4.018
- Readonly 2.05
- Regexp::Common 2017060201
- Role::HasMessage 0.006
- Role::Identifiable::HasIdent 0.007
- Role::Tiny 2.002004
- Scalar::Util 1.56
- Scalar::Util::Numeric 0.40
- Scope::Guard 0.21
- Set::Array 0.30
- Set::IntervalTree 0.12
- Set::IntSpan 1.19
- Set::IntSpan::Fast 1.15
- Set::Object 1.42
- Set::Scalar 1.29
- Shell 0.73
- Socket 2.032
- Software::License 0.104001
- Specio 0.47
- SQL::Abstract 2.000001
- SQL::Statement 1.414
- Statistics::Basic 1.6611
- Statistics::Descriptive 3.0800
- Storable 3.25
- strictures 2.000006
- String::Flogger 1.101245
- String::Print 0.94
- String::RewritePrefix 0.008
- String::Truncate 1.100602
- Sub::Exporter 0.988
- Sub::Exporter::ForMethods 0.100054
- Sub::Exporter::Progressive 0.001013
- Sub::Identify 0.14
- Sub::Info 0.002
- Sub::Install 0.928
- Sub::Name 0.26
- Sub::Quote 2.006006
- Sub::Uplevel 0.2800
- Sub::Uplevel 0.2800
- SVG 2.86
- Switch 2.17
- Sys::Info 0.7811
- Sys::Info::Base 0.7807
- Sys::Info::Driver::Linux 0.7905
- Sys::Info::Driver::Unknown 0.79
- Template 3.100
- Template::Plugin::Number::Format 1.06
- Term::Encoding 0.03
- Term::ReadKey 2.38
- Term::ReadLine::Gnu 1.42
- Term::Table 0.016
- Term::UI 0.50
- Test 1.26
- Test2::Plugin::NoWarnings 0.09
- Test2::Require::Module 0.000145
- Test::ClassAPI 1.07
- Test::CleanNamespaces 0.24
- Test::Deep 1.130
- Test::Differences 0.69
- Test::Exception 0.43
- Test::Fatal 0.016
- Test::File::ShareDir::Dist 1.001002
- Test::Harness 3.44
- Test::LeakTrace 0.17
- Test::Memory::Cycle 1.06
- Test::More 1.302190
- Test::More::UTF8 0.05
- Test::Most 0.37
- Test::Needs 0.002009
- Test::NoWarnings 1.06
- Test::Output 1.033
- Test::Pod 1.52
- Test::Requires 0.11
- Test::RequiresInternet 0.05
- Test::Simple 1.302190
- Test::Version 2.09
- Test::Warn 0.36
- Test::Warnings 0.031
- Test::Without::Module 0.20
- Text::Aligner 0.16
- Text::Balanced 2.04
- Text::CSV 2.01
- Text::CSV_XS 1.47
- Text::Diff 1.45
- Text::Format 0.62
- Text::Glob 0.11
- Text::Iconv 1.7
- Text::ParseWords 3.31
- Text::Soundex 3.05
- Text::Table 1.134
- Text::Template 1.60
- Thread::Queue 3.13
- Throwable 1.000
- Tie::Function 0.02
- Tie::IxHash 1.23
- Time::HiRes 1.9764
- Time::Local 1.30
- Time::Piece 1.3401
- Time::Piece::MySQL 0.06
- Tree::DAG_Node 1.32
- Try::Tiny 0.31
- Types::Serialiser 1.01
- Unicode::LineBreak 2019.001
- UNIVERSAL::moniker 0.08
- Unix::Processors 2.046
- URI 5.10
- URI::Escape 5.10
- Variable::Magic 0.62
- version 0.9929
- Want 0.29
- WWW::RobotRules 6.02
- XML::Bare 0.53
- XML::DOM 1.46
- XML::Filter::BufferText 1.01
- XML::NamespaceSupport 1.12
- XML::Parser 2.46
- XML::RegExp 0.04
- XML::SAX 1.02
- XML::SAX::Base 1.09
- XML::SAX::Expat 0.51
- XML::SAX::Writer 0.57
- XML::Simple 2.25
- XML::Tiny 2.07
- XML::Twig 3.52
- XML::XPath 1.44
- XSLoader 0.24
- YAML 1.30
- YAML::Tiny 1.73
More Information
For more information visit the Perl website.
Dependencies
This version of Perl has a direct dependency on: DB/18.1.40-GCCcore-11.3.0 expat/2.4.8-GCCcore-11.3.0 GCCcore/11.3.0 libreadline/8.1.2-GCCcore-11.3.0 ncurses/6.3-GCCcore-11.3.0 OpenSSL/1.1 zlib/1.2.12-GCCcore-11.3.0
Required By
This version of Perl is a direct dependent of: ABRicate/1.0.0-gompi-2022a any2fasta/0.4.2-GCCcore-11.3.0 Archive-Zip/1.68-GCCcore-11.3.0 Autoconf/2.71-GCCcore-11.3.0 Automake/1.16.5-GCCcore-11.3.0 Bio-DB-HTS/3.01-GCC-11.3.0 BioPerl/1.7.8-GCCcore-11.3.0 Bio-SearchIO-hmmer/1.7.3-GCC-11.3.0 Bowtie2/2.4.5-GCC-11.3.0 BWA/0.7.17-GCCcore-11.3.0 canu/2.2-GCCcore-11.3.0 CD-HIT/4.8.1-GCC-11.3.0 Compress-Raw-Zlib/2.202-GCCcore-11.3.0 DBD-mysql/4.050-GCC-11.3.0 DB_File/1.858-GCCcore-11.3.0 EVidenceModeler/2.1.0-GCCcore-11.3.0 funannotate/1.8.17-foss-2022a GeneMark-ET/4.72-GCCcore-11.3.0 git/2.36.0-GCCcore-11.3.0-nodocs GlimmerHMM/3.0.4c-GCC-11.3.0 Graphviz/5.0.0-GCCcore-11.3.0 HH-suite/3.3.0-gompi-2022a InterProScan/5.61-93.0-foss-2022a intltool/0.51.0-GCCcore-11.3.0 makeinfo/6.8-GCCcore-11.3.0 parallel/20220722-GCCcore-11.3.0 polymake/4.8-gfbf-2022a Proteinortho/6.2.3-gompi-2022a QUAST/5.2.0-foss-2022a RepeatMasker/4.1.5-foss-2022a RSEM/1.3.3-foss-2022a SVG/2.87-GCC-11.3.0 Trinity/2.15.1-foss-2022a tRNAscan-SE/2.0.11-foss-2022a vcflib/1.0.9-foss-2022a-R-4.2.3 VCFtools/0.1.16-GCC-11.3.0 VEP/107-GCC-11.3.0 XML-LibXML/2.0207-GCCcore-11.3.0
Other Versions
These versions of Perl are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
Last modified on 12th January 2023