BioServices 1.11.2-foss-2022a

There is a newer install of BioServices

Bioservices is a Python package that provides access to many Bioinformatices Web Services (e.g., UniProt) and a framework to easily implement Web Services wrappers (based on WSDL/SOAP or REST protocols).

Accessing BioServices 1.11.2-foss-2022a

To load the module for BioServices 1.11.2-foss-2022a please use this command on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs):

module load bear-apps/2022a
module load BioServices/1.11.2-foss-2022a

BEAR Apps Version

2022a

Architectures

EL8-cascadelakeEL8-icelake

The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.

Extensions

  • BioServices 1.11.2
  • cattrs 23.1.2
  • colorama 0.4.4
  • colorlog 6.7.0
  • easydev 0.12.1
  • exceptiongroup 1.1.3
  • flit 3.9.0
  • flit-scm-1.7.0
  • flit_core 3.9.0
  • gevent 23.9.1
  • greenlet 3.0.0
  • grequests 0.7.0
  • pexpect 4.8.0
  • ptyprocess 0.7.0
  • requests-cache-1.1.0
  • suds-community-1.1.2
  • url-normalize-1.4.3
  • wrapt 1.15.0
  • xmltodict 0.13.0
  • zope.event 5.0
  • zope.interface 6.1

More Information

For more information visit the BioServices website.

Dependencies

This version of BioServices has a direct dependency on: BeautifulSoup/4.10.0-GCCcore-11.3.0 foss/2022a lxml/4.9.1-GCCcore-11.3.0 matplotlib/3.5.2-foss-2022a Python/3.10.4-GCCcore-11.3.0 scikit-learn/1.1.2-foss-2022a SciPy-bundle/2022.05-foss-2022a tqdm/4.64.0-GCCcore-11.3.0

Other Versions

These versions of BioServices are available on the BEAR systems (BlueBEAR, BEAR Cloud VMs, and CaStLeS VMs). These will be retained in accordance with our Applications Support and Retention Policy.

Last modified on 29th November 2023