Proteinortho 6.2.3-gompi-2022a
Proteinortho is a tool to detect orthologous genes within different species.Accessing Proteinortho 6.2.3-gompi-2022a
To load the module for Proteinortho 6.2.3-gompi-2022a please use this command on the BEAR systems (BlueBEAR and BEAR Cloud VMs):
📋
module load bear-apps/2022a
module load Proteinortho/6.2.3-gompi-2022a
BEAR Apps Version
Architectures
EL8-cascadelake — EL8-sapphirerapids
The listed architectures consist of two part: OS-CPU. The OS used is represented by EL and there are several different processor (CPU) types available on BlueBEAR. More information about the processor types on BlueBEAR is available on the BlueBEAR Job Submission page.
More Information
For more information visit the Proteinortho website.
Dependencies
This version of Proteinortho has a direct dependency on: BLAST+/2.13.0-gompi-2022a DIAMOND/2.1.0-GCC-11.3.0 gompi/2022a Perl/5.34.1-GCCcore-11.3.0 Python/3.10.4-GCCcore-11.3.0
Required By
This version of Proteinortho is a direct dependent of: funannotate/1.8.17-foss-2022a
Other Versions
These versions of Proteinortho are available on the BEAR systems (BlueBEAR and BEAR Cloud VMs). These will be retained in accordance with our Applications Support and Retention Policy.
| Version | BEAR Apps Version |
|---|---|
| 6.0.23-foss-2019b-Python-3.7.4-Perl-5.30.0 | 2019b |
| 6.0.23-foss-2019b-Python-2.7.16-Perl-5.30.0 | 2019b |
Last modified on 12th August 2024